Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gm38395-201ENSMUST00000199904 830 ntBASIC0.84□□□□□ -2.27
Trav7d-4Q5R1H9 Gm19855-201ENSMUST00000210145 249 ntBASIC0.84□□□□□ -2.27
Trav7d-4Q5R1H9 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.84□□□□□ -2.27
Trav7d-4Q5R1H9 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.84□□□□□ -2.27
Trav7d-4Q5R1H9 Gm24625-201ENSMUST00000082622 130 ntBASIC0.84□□□□□ -2.27
Trav7d-4Q5R1H9 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC0.84□□□□□ -2.28
Trav7d-4Q5R1H9 Gm26074-201ENSMUST00000104063 129 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm24588-201ENSMUST00000116696 83 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm11358-201ENSMUST00000122310 373 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm24005-201ENSMUST00000158459 296 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm18588-201ENSMUST00000177308 492 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Mir7091-201ENSMUST00000184075 79 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Mir7225-201ENSMUST00000184178 54 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm28506-201ENSMUST00000189937 150 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm29167-201ENSMUST00000190024 377 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm37162-201ENSMUST00000191708 551 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm44408-201ENSMUST00000200205 66 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm5001-201ENSMUST00000204361 331 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm18696-201ENSMUST00000220103 274 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm45815-201ENSMUST00000220241 146 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Snora41-201ENSMUST00000082668 132 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm25128-201ENSMUST00000083339 76 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm25207-201ENSMUST00000093745 107 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.83□□□□□ -2.28
Trav7d-4Q5R1H9 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm22073-201ENSMUST00000122668 189 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm24902-201ENSMUST00000158126 123 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm25831-201ENSMUST00000158924 163 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Mir3061-201ENSMUST00000175129 91 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm25069-201ENSMUST00000175238 86 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm27957-201ENSMUST00000184054 127 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm27419-201ENSMUST00000184576 109 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm9251-201ENSMUST00000197202 628 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm43427-201ENSMUST00000198188 331 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm44282-201ENSMUST00000203199 190 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm45403-201ENSMUST00000209453 276 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.82□□□□□ -2.28
Trav7d-4Q5R1H9 Mir872-201ENSMUST00000104728 81 ntBASIC0.81□□□□□ -2.28
Trav7d-4Q5R1H9 Gm11254-201ENSMUST00000122368 653 ntBASIC0.81□□□□□ -2.28
Trav7d-4Q5R1H9 Gm22556-201ENSMUST00000157803 100 ntBASIC0.81□□□□□ -2.28
Trav7d-4Q5R1H9 Gm24085-201ENSMUST00000175172 116 ntBASIC0.81□□□□□ -2.28
Trav7d-4Q5R1H9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.81□□□□□ -2.28
Trav7d-4Q5R1H9 Gm42857-201ENSMUST00000200823 339 ntBASIC0.81□□□□□ -2.28
Trav7d-4Q5R1H9 Gm23515-201ENSMUST00000082829 107 ntBASIC0.81□□□□□ -2.28
Trav7d-4Q5R1H9 Gm26108-201ENSMUST00000083973 191 ntBASIC0.81□□□□□ -2.28
Trav7d-4Q5R1H9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.81□□□□□ -2.28
Trav7d-4Q5R1H9 Gm26339-201ENSMUST00000102368 99 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Gm23836-201ENSMUST00000104434 129 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Gm22771-201ENSMUST00000104449 91 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Gm24808-201ENSMUST00000157993 118 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Gm24076-201ENSMUST00000158179 94 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Gm24638-201ENSMUST00000179807 132 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Mir6381-201ENSMUST00000183426 87 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Gm28414-201ENSMUST00000190111 294 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.8□□□□□ -2.28
Trav7d-4Q5R1H9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm13729-201ENSMUST00000120328 406 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm25102-201ENSMUST00000122479 112 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm22281-201ENSMUST00000157198 103 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm25392-201ENSMUST00000157335 297 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Mir5104-201ENSMUST00000175319 94 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm26200-201ENSMUST00000180273 79 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm11392-201ENSMUST00000181419 710 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Mir8119-201ENSMUST00000183371 129 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm27793-201ENSMUST00000183405 76 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm28257-201ENSMUST00000185244 463 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm18185-201ENSMUST00000186725 667 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm20102-201ENSMUST00000222445 220 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Gm25683-201ENSMUST00000083940 131 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.79□□□□□ -2.28
Trav7d-4Q5R1H9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Trav7d-4Q5R1H9 Gm22935-201ENSMUST00000103960 104 ntBASIC0.78□□□□□ -2.28
Trav7d-4Q5R1H9 Gm14269-201ENSMUST00000120455 306 ntBASIC0.78□□□□□ -2.28
Trav7d-4Q5R1H9 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms