Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm12102-201ENSMUST00000118251 604 ntBASIC0.47□□□□□ -2.33
Trav5d-4Q5R1F6 Gm22482-201ENSMUST00000122563 359 ntBASIC0.47□□□□□ -2.33
Trav5d-4Q5R1F6 Gm23000-201ENSMUST00000157083 139 ntBASIC0.47□□□□□ -2.33
Trav5d-4Q5R1F6 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Trav5d-4Q5R1F6 Gm38213-201ENSMUST00000193203 173 ntBASIC0.47□□□□□ -2.33
Trav5d-4Q5R1F6 Gm44449-201ENSMUST00000203610 153 ntBASIC0.47□□□□□ -2.33
Trav5d-4Q5R1F6 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.47□□□□□ -2.33
Trav5d-4Q5R1F6 Gm24311-201ENSMUST00000082570 104 ntBASIC0.47□□□□□ -2.33
Trav5d-4Q5R1F6 Gm25876-201ENSMUST00000104329 119 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm9059-201ENSMUST00000118319 183 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm11792-201ENSMUST00000120640 168 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm26358-201ENSMUST00000158215 97 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm16588-201ENSMUST00000162889 355 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm23619-201ENSMUST00000178411 94 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm25474-201ENSMUST00000179052 94 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm22047-201ENSMUST00000179176 94 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm44358-201ENSMUST00000196301 98 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm44308-201ENSMUST00000197080 99 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm26228-201ENSMUST00000082512 107 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm25080-201ENSMUST00000082526 107 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm22229-201ENSMUST00000082987 108 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm25518-201ENSMUST00000083864 107 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.46□□□□□ -2.34
Trav5d-4Q5R1F6 Gm26339-201ENSMUST00000102368 99 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Gm23203-201ENSMUST00000104374 107 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Mir6394-201ENSMUST00000184738 99 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Gm28257-201ENSMUST00000185244 463 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Gm28740-201ENSMUST00000186142 215 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Gm38060-201ENSMUST00000194822 464 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Gm43556-201ENSMUST00000196186 681 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Gm44337-201ENSMUST00000196553 114 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Gm42855-201ENSMUST00000197388 253 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Gm44396-201ENSMUST00000199843 114 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 AC138667.2-201ENSMUST00000224880 598 ntBASIC0.45□□□□□ -2.34
Trav5d-4Q5R1F6 Gm24172-201ENSMUST00000104127 117 ntBASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Gm6829-201ENSMUST00000119858 360 ntBASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Gm23535-201ENSMUST00000157542 106 ntBASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Gm25557-201ENSMUST00000158084 315 ntBASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Gm9830-201ENSMUST00000178509 357 ntBASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Gm29022-201ENSMUST00000190702 225 ntBASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Mir10b-201ENSMUST00000083566 68 ntBASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Snord33-201ENSMUST00000083694 84 ntBASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC0.44□□□□□ -2.34
Trav5d-4Q5R1F6 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm24271-201ENSMUST00000102327 111 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm13967-201ENSMUST00000120404 380 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm24385-201ENSMUST00000122694 350 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm23435-201ENSMUST00000157183 156 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm22163-201ENSMUST00000158408 135 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm24863-201ENSMUST00000179499 107 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm25253-201ENSMUST00000179958 107 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm28439-201ENSMUST00000187714 876 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm42506-201ENSMUST00000202009 150 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm43898-201ENSMUST00000204456 424 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 DQ267101-201ENSMUST00000082562 73 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm26437-201ENSMUST00000082595 105 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm22302-201ENSMUST00000082657 106 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm25475-201ENSMUST00000082825 180 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Gm25650-201ENSMUST00000083784 162 ntBASIC0.43□□□□□ -2.34
Trav5d-4Q5R1F6 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.42□□□□□ -2.34
Trav5d-4Q5R1F6 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Trav5d-4Q5R1F6 Gm22654-201ENSMUST00000157874 105 ntBASIC0.42□□□□□ -2.34
Trav5d-4Q5R1F6 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Trav5d-4Q5R1F6 Gm26914-201ENSMUST00000182262 223 ntBASIC0.42□□□□□ -2.34
Trav5d-4Q5R1F6 Mir6364-201ENSMUST00000183396 86 ntBASIC0.42□□□□□ -2.34
Trav5d-4Q5R1F6 Gm44458-201ENSMUST00000196594 143 ntBASIC0.42□□□□□ -2.34
Trav5d-4Q5R1F6 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.42□□□□□ -2.34
Trav5d-4Q5R1F6 Gm24338-201ENSMUST00000104205 127 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Gm23605-201ENSMUST00000157255 127 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Gm25413-201ENSMUST00000158544 312 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Mir6985-201ENSMUST00000184641 61 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Gm37869-201ENSMUST00000193385 595 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Gm36956-201ENSMUST00000193830 214 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Gm25896-201ENSMUST00000083713 136 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Gm24261-201ENSMUST00000083744 104 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
Trav5d-4Q5R1F6 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.4□□□□□ -2.34
Trav5d-4Q5R1F6 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.4□□□□□ -2.34
Trav5d-4Q5R1F6 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.4□□□□□ -2.35
Trav5d-4Q5R1F6 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Trav5d-4Q5R1F6 Gm13475-201ENSMUST00000119290 234 ntBASIC0.4□□□□□ -2.35
Trav5d-4Q5R1F6 Gm43993-201ENSMUST00000203972 247 ntBASIC0.4□□□□□ -2.35
Trav5d-4Q5R1F6 Gm18213-201ENSMUST00000207850 178 ntBASIC0.4□□□□□ -2.35
Trav5d-4Q5R1F6 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.4□□□□□ -2.35
Trav5d-4Q5R1F6 AC116465.1-201ENSMUST00000220324 235 ntBASIC0.4□□□□□ -2.35
Trav5d-4Q5R1F6 Gm24152-201ENSMUST00000082764 163 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms