Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Snora3-201ENSMUST00000083082 132 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm24431-201ENSMUST00000104073 66 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm13475-201ENSMUST00000119290 234 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm25559-201ENSMUST00000157182 74 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm23557-201ENSMUST00000157820 138 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm27510-201ENSMUST00000158214 64 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm16546-201ENSMUST00000159442 355 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm20613-201ENSMUST00000175828 345 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm28740-201ENSMUST00000186142 215 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm43245-201ENSMUST00000197603 468 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm44429-201ENSMUST00000203542 186 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm26457-201ENSMUST00000082678 78 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm22972-201ENSMUST00000083297 131 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm22577-201ENSMUST00000083731 109 ntBASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
Col27a1Q5QNQ9 Gm24594-201ENSMUST00000122502 99 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm23172-201ENSMUST00000157160 124 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm25423-201ENSMUST00000157609 107 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm24229-201ENSMUST00000158830 118 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm26363-201ENSMUST00000158866 83 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm24390-201ENSMUST00000179578 62 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Mir6380-201ENSMUST00000184334 81 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm18357-201ENSMUST00000188184 580 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm9156-201ENSMUST00000189660 463 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm34073-201ENSMUST00000195736 212 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm5034-201ENSMUST00000199115 634 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Mir1291-201ENSMUST00000199842 117 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm44910-201ENSMUST00000208451 396 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Snora34-201ENSMUST00000083402 138 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm25414-201ENSMUST00000101814 107 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm25269-201ENSMUST00000122601 104 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm22027-201ENSMUST00000122737 127 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm22654-201ENSMUST00000157874 105 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm22431-201ENSMUST00000158545 107 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Mir7091-201ENSMUST00000184075 79 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm23370-201ENSMUST00000199545 130 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm25079-201ENSMUST00000082529 203 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.89□□□□□ -2.27
Col27a1Q5QNQ9 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 Gm22485-201ENSMUST00000157990 109 ntBASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 Gm27607-201ENSMUST00000185162 122 ntBASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 Gm44128-201ENSMUST00000204909 219 ntBASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 Gm45366-201ENSMUST00000209828 384 ntBASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 Gm24035-201ENSMUST00000082867 107 ntBASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Col27a1Q5QNQ9 Mir293-201ENSMUST00000104841 80 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm23411-201ENSMUST00000157988 62 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm24577-201ENSMUST00000158580 63 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm21815-201ENSMUST00000178213 664 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm22510-201ENSMUST00000179304 79 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm26336-201ENSMUST00000179449 79 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm26390-201ENSMUST00000179628 79 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm27313-201ENSMUST00000183500 142 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Mir6388-201ENSMUST00000184417 75 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm44337-201ENSMUST00000196553 114 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm18854-201ENSMUST00000211196 329 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm45907-201ENSMUST00000213023 193 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 Gm40810-201ENSMUST00000219149 253 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.87□□□□□ -2.27
Col27a1Q5QNQ9 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms