Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Mir340-201ENSMUST00000083483 98 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Usp28Q5I043 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Gm23010-201ENSMUST00000104151 126 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm22731-201ENSMUST00000158086 94 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm23858-201ENSMUST00000158384 106 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm24333-201ENSMUST00000175101 84 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm23793-201ENSMUST00000179396 117 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm18357-201ENSMUST00000188184 580 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm37162-201ENSMUST00000191708 551 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm19901-201ENSMUST00000192191 495 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Snord43-201ENSMUST00000199549 108 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm43993-201ENSMUST00000203972 247 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Mir151-201ENSMUST00000083678 68 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Usp28Q5I043 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.51□□□□□ -2.17
Usp28Q5I043 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Usp28Q5I043 Mir1b-201ENSMUST00000117012 122 ntBASIC1.5□□□□□ -2.17
Usp28Q5I043 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.5□□□□□ -2.17
Usp28Q5I043 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.5□□□□□ -2.17
Usp28Q5I043 Gm23122-201ENSMUST00000157645 103 ntBASIC1.5□□□□□ -2.17
Usp28Q5I043 Gm22338-201ENSMUST00000157715 129 ntBASIC1.5□□□□□ -2.17
Usp28Q5I043 Gm25994-201ENSMUST00000175392 101 ntBASIC1.5□□□□□ -2.17
Usp28Q5I043 Mir7014-201ENSMUST00000183853 63 ntBASIC1.5□□□□□ -2.17
Usp28Q5I043 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.5□□□□□ -2.17
Usp28Q5I043 Gm43505-201ENSMUST00000200579 139 ntBASIC1.5□□□□□ -2.17
Usp28Q5I043 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.5□□□□□ -2.17
Usp28Q5I043 Mir211-201ENSMUST00000083651 106 ntBASIC1.5□□□□□ -2.17
Usp28Q5I043 Gm24598-201ENSMUST00000122510 74 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 Gm22085-201ENSMUST00000158344 110 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 Gm16162-201ENSMUST00000162296 297 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 Gm20438-201ENSMUST00000174441 329 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 Gm26400-201ENSMUST00000175012 85 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Usp28Q5I043 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.49□□□□□ -2.17
Usp28Q5I043 Gm21064-202ENSMUST00000190583 278 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 Gm43427-201ENSMUST00000198188 331 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.49□□□□□ -2.17
Usp28Q5I043 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 AC154747.1-201ENSMUST00000225265 239 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Usp28Q5I043 Gm25409-201ENSMUST00000083764 131 ntBASIC1.49□□□□□ -2.17
Usp28Q5I043 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm24079-201ENSMUST00000104352 132 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm14882-201ENSMUST00000117216 218 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm12309-201ENSMUST00000119889 182 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm14782-201ENSMUST00000120151 195 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm12785-201ENSMUST00000122052 172 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm11254-201ENSMUST00000122368 653 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Mir1949-201ENSMUST00000157434 141 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm22217-201ENSMUST00000157556 313 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm23090-201ENSMUST00000177331 78 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Mir7017-201ENSMUST00000184894 62 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm29167-201ENSMUST00000190024 377 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Gm26265-202ENSMUST00000196326 133 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.48□□□□□ -2.17
Usp28Q5I043 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.48□□□□□ -2.17
Usp28Q5I043 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.48□□□□□ -2.17
Usp28Q5I043 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.48□□□□□ -2.17
Usp28Q5I043 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm22750-201ENSMUST00000102076 103 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm13588-201ENSMUST00000120026 135 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm22447-201ENSMUST00000158155 92 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm23181-201ENSMUST00000158685 110 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm24737-201ENSMUST00000158861 100 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm24618-201ENSMUST00000177718 94 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm23953-201ENSMUST00000178214 94 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm24799-201ENSMUST00000178431 79 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm26332-201ENSMUST00000179813 94 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm22863-201ENSMUST00000180265 94 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm26968-201ENSMUST00000182894 481 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm18546-201ENSMUST00000197245 676 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Mir7118-201ENSMUST00000197760 61 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm44655-201ENSMUST00000207768 423 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Usp28Q5I043 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Usp28Q5I043 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 204.1 ms