Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC-0.76□□□□□ -2.53
Ccdc88bQ4QRL3 Gm28956-201ENSMUST00000189047 427 ntBASIC-0.76□□□□□ -2.53
Ccdc88bQ4QRL3 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.76□□□□□ -2.53
Ccdc88bQ4QRL3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC-0.76□□□□□ -2.53
Ccdc88bQ4QRL3 AC122905.2-201ENSMUST00000220325 269 ntBASIC-0.76□□□□□ -2.53
Ccdc88bQ4QRL3 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.76□□□□□ -2.53
Ccdc88bQ4QRL3 AC154692.1-201ENSMUST00000228314 544 ntBASIC-0.76□□□□□ -2.53
Ccdc88bQ4QRL3 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.76□□□□□ -2.53
Ccdc88bQ4QRL3 Gm16400-201ENSMUST00000116523 1029 ntBASIC-0.77□□□□□ -2.53
Ccdc88bQ4QRL3 Gm12370-201ENSMUST00000117809 604 ntBASIC-0.77□□□□□ -2.53
Ccdc88bQ4QRL3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC-0.77□□□□□ -2.53
Ccdc88bQ4QRL3 Gm25933-201ENSMUST00000178943 108 ntBASIC-0.77□□□□□ -2.53
Ccdc88bQ4QRL3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.77□□□□□ -2.53
Ccdc88bQ4QRL3 AC125523.1-201ENSMUST00000228018 934 ntBASIC-0.77□□□□□ -2.53
Ccdc88bQ4QRL3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
Ccdc88bQ4QRL3 Gm14852-201ENSMUST00000120065 647 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Gm21758-201ENSMUST00000179336 819 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Gm26265-202ENSMUST00000196326 133 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Gm43124-201ENSMUST00000201878 278 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Gm46997-201ENSMUST00000222108 217 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Mir500-201ENSMUST00000093600 92 ntBASIC-0.78□□□□□ -2.53
Ccdc88bQ4QRL3 Gm14594-201ENSMUST00000118052 537 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 Gm14590-201ENSMUST00000118934 537 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 Gm14713-201ENSMUST00000122362 686 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 Gm14596-201ENSMUST00000180268 537 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 Gm14595-201ENSMUST00000180335 537 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 Gm28191-201ENSMUST00000189112 211 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 Gm38395-201ENSMUST00000199904 830 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 Gm35262-201ENSMUST00000215133 267 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 AC122225.1-201ENSMUST00000215641 369 ntBASIC-0.79□□□□□ -2.54
Ccdc88bQ4QRL3 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Gm11384-201ENSMUST00000121376 303 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 AC167669.4-201ENSMUST00000225967 140 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Gm37096-201ENSMUST00000192317 2058 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Gm14716-201ENSMUST00000120138 718 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Gm11792-201ENSMUST00000120640 168 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Gm25643-201ENSMUST00000158874 103 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Snora20-201ENSMUST00000082703 128 ntBASIC-0.8□□□□□ -2.54
Ccdc88bQ4QRL3 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm14765-201ENSMUST00000121954 326 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm24598-201ENSMUST00000122510 74 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm25371-201ENSMUST00000158162 101 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm20613-201ENSMUST00000175828 345 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm28241-201ENSMUST00000190916 235 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm37757-201ENSMUST00000193072 210 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.81□□□□□ -2.54
Ccdc88bQ4QRL3 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm24172-201ENSMUST00000104127 117 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm4910-201ENSMUST00000119605 366 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm28848-201ENSMUST00000189984 168 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm44449-201ENSMUST00000203610 153 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm25896-201ENSMUST00000083713 136 ntBASIC-0.82□□□□□ -2.54
Ccdc88bQ4QRL3 Gm4746-201ENSMUST00000120395 2406 ntBASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Gm23956-201ENSMUST00000157211 119 ntBASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Gm2962-201ENSMUST00000159266 336 ntBASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Gm21978-201ENSMUST00000179696 377 ntBASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Gm37599-201ENSMUST00000193067 489 ntBASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Gm25794-201ENSMUST00000083286 107 ntBASIC-0.83□□□□□ -2.54
Ccdc88bQ4QRL3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC-0.84□□□□□ -2.54
Ccdc88bQ4QRL3 Gm17655-201ENSMUST00000167969 255 ntBASIC-0.84□□□□□ -2.54
Ccdc88bQ4QRL3 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.84□□□□□ -2.54
Ccdc88bQ4QRL3 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC-0.84□□□□□ -2.54
Ccdc88bQ4QRL3 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.85□□□□□ -2.55
Ccdc88bQ4QRL3 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.85□□□□□ -2.55
Ccdc88bQ4QRL3 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.85□□□□□ -2.55
Ccdc88bQ4QRL3 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.85□□□□□ -2.55
Ccdc88bQ4QRL3 Gm44429-201ENSMUST00000203542 186 ntBASIC-0.85□□□□□ -2.55
Ccdc88bQ4QRL3 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC-0.85□□□□□ -2.55
Ccdc88bQ4QRL3 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC-0.85□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 149.5 ms