Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm28369-201ENSMUST00000188993 315 ntBASIC1.78□□□□□ -2.12
Trim40Q3UWA4 Gm29037-201ENSMUST00000189092 313 ntBASIC1.78□□□□□ -2.12
Trim40Q3UWA4 Gm28909-201ENSMUST00000189406 315 ntBASIC1.78□□□□□ -2.12
Trim40Q3UWA4 Gm28861-201ENSMUST00000189681 315 ntBASIC1.78□□□□□ -2.12
Trim40Q3UWA4 Gm29180-201ENSMUST00000190003 315 ntBASIC1.78□□□□□ -2.12
Trim40Q3UWA4 Gm29575-201ENSMUST00000190597 315 ntBASIC1.78□□□□□ -2.12
Trim40Q3UWA4 Gm29469-201ENSMUST00000191448 315 ntBASIC1.78□□□□□ -2.12
Trim40Q3UWA4 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.78□□□□□ -2.12
Trim40Q3UWA4 Mir151-201ENSMUST00000083678 68 ntBASIC1.78□□□□□ -2.12
Trim40Q3UWA4 Mir1193-201ENSMUST00000116761 121 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 Gm11572-201ENSMUST00000119164 120 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 Gm23858-201ENSMUST00000158384 106 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 Gm26214-201ENSMUST00000158581 107 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 Gm17067-202ENSMUST00000180131 123 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 Gm37377-201ENSMUST00000191733 304 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 Gm25078-201ENSMUST00000082530 107 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 Mir340-201ENSMUST00000083483 98 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.77□□□□□ -2.13
Trim40Q3UWA4 Mir3096-201ENSMUST00000116685 71 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm24598-201ENSMUST00000122510 74 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm22216-201ENSMUST00000157557 114 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm23474-201ENSMUST00000158884 75 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Mir6993-201ENSMUST00000184912 65 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm29147-201ENSMUST00000186846 315 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm29227-201ENSMUST00000187139 315 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm29034-201ENSMUST00000188099 315 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm28160-201ENSMUST00000191229 315 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm32175-201ENSMUST00000193641 346 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm37129-201ENSMUST00000195791 315 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm24977-201ENSMUST00000083106 163 ntBASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
Trim40Q3UWA4 Gm25094-201ENSMUST00000103992 131 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm11854-201ENSMUST00000117839 446 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm11862-201ENSMUST00000119678 659 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm14709-201ENSMUST00000121225 304 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm23983-201ENSMUST00000157142 114 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Mir1949-201ENSMUST00000157434 141 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm26345-201ENSMUST00000157534 120 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm23759-201ENSMUST00000158351 268 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm25450-201ENSMUST00000179144 107 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm37778-201ENSMUST00000191732 190 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm43406-201ENSMUST00000200356 334 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trim40Q3UWA4 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trim40Q3UWA4 Gm15986-201ENSMUST00000122153 400 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm24629-201ENSMUST00000122762 89 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Mir1936-201ENSMUST00000158699 93 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm29665-201ENSMUST00000191457 528 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm44477-201ENSMUST00000199661 110 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm44655-201ENSMUST00000207768 423 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm45296-201ENSMUST00000209625 205 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm23406-201ENSMUST00000082537 122 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm22972-201ENSMUST00000083297 131 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Trim40Q3UWA4 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm25421-201ENSMUST00000104218 164 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm12417-201ENSMUST00000119153 403 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm22814-201ENSMUST00000157452 104 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm22731-201ENSMUST00000158086 94 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm25253-201ENSMUST00000179958 107 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm18357-201ENSMUST00000188184 580 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm44373-201ENSMUST00000196112 169 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm20144-201ENSMUST00000203031 165 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm45754-201ENSMUST00000212380 279 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm25793-201ENSMUST00000083287 107 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm26107-201ENSMUST00000083972 107 ntBASIC1.73□□□□□ -2.13
Trim40Q3UWA4 Gm24478-201ENSMUST00000157439 158 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Gm22338-201ENSMUST00000157715 129 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Gm26402-201ENSMUST00000158499 113 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Gm20438-201ENSMUST00000174441 329 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Gm27905-201ENSMUST00000184005 207 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Gm27997-201ENSMUST00000184942 69 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Mir7227-201ENSMUST00000200408 59 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Gm45616-201ENSMUST00000211711 319 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Gm24355-201ENSMUST00000082858 122 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Gm24764-201ENSMUST00000083686 199 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 Gm23845-201ENSMUST00000083834 152 ntBASIC1.72□□□□□ -2.13
Trim40Q3UWA4 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Mir873a-201ENSMUST00000104863 77 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Gm16328-201ENSMUST00000126985 196 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Gm23172-201ENSMUST00000157160 124 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms