Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm16038-201ENSMUST00000159317 193 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm20613-201ENSMUST00000175828 345 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm25730-201ENSMUST00000178753 165 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm10105-201ENSMUST00000184601 270 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm29397-201ENSMUST00000185205 333 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm28848-201ENSMUST00000189984 168 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm44429-201ENSMUST00000203542 186 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm23100-201ENSMUST00000083455 141 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm11854-201ENSMUST00000117839 446 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm13396-201ENSMUST00000120617 271 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm6956-201ENSMUST00000134724 546 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm23718-201ENSMUST00000157350 307 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm25909-201ENSMUST00000157619 121 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm22338-201ENSMUST00000157715 129 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm24853-201ENSMUST00000158026 121 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm24154-201ENSMUST00000175261 130 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm7654-201ENSMUST00000186738 683 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm20257-202ENSMUST00000188643 130 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm28211-201ENSMUST00000190920 315 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm43472-201ENSMUST00000200175 154 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm24043-201ENSMUST00000083108 116 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm23041-201ENSMUST00000083868 106 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.47□□□□□ -2.17
Upf3aQ3ULJ3 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Gm26249-201ENSMUST00000116708 118 ntBASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Mir6346-201ENSMUST00000183982 81 ntBASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Mir7059-201ENSMUST00000184825 59 ntBASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Gm18357-201ENSMUST00000188184 580 ntBASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Gm45365-201ENSMUST00000209489 256 ntBASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Upf3aQ3ULJ3 Gm26500-201ENSMUST00000101867 106 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Gm42606-201ENSMUST00000114209 239 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Gm23186-201ENSMUST00000180078 107 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Mir7683-201ENSMUST00000183842 61 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Gm5023-201ENSMUST00000217442 587 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Snord68-201ENSMUST00000082516 86 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Gm23721-201ENSMUST00000083005 107 ntBASIC1.45□□□□□ -2.18
Upf3aQ3ULJ3 Gm12432-201ENSMUST00000119540 186 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Gm22217-201ENSMUST00000157556 313 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Gm17100-201ENSMUST00000168963 272 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Gm24308-201ENSMUST00000177773 114 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Gm27410-201ENSMUST00000183851 115 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Gm42960-201ENSMUST00000202160 241 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Gm44811-201ENSMUST00000209120 228 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Gm30155-201ENSMUST00000223458 339 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Gm22365-201ENSMUST00000093750 117 ntBASIC1.44□□□□□ -2.18
Upf3aQ3ULJ3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm22673-201ENSMUST00000104415 131 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm11798-201ENSMUST00000119150 421 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm24895-201ENSMUST00000122742 74 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm25827-201ENSMUST00000157089 107 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm23435-201ENSMUST00000157183 156 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm22963-201ENSMUST00000157960 91 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm25333-201ENSMUST00000158035 246 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm22731-201ENSMUST00000158086 94 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm22113-201ENSMUST00000158343 104 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm23858-201ENSMUST00000158384 106 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm20462-201ENSMUST00000172623 408 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm38109-201ENSMUST00000195386 181 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm43238-201ENSMUST00000196463 359 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm33866-201ENSMUST00000196911 289 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Gm43624-201ENSMUST00000197368 180 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Mir1291-201ENSMUST00000199842 117 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Snora34-201ENSMUST00000083402 138 ntBASIC1.43□□□□□ -2.18
Upf3aQ3ULJ3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm22780-201ENSMUST00000104084 132 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm25274-201ENSMUST00000104296 135 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm22193-201ENSMUST00000116868 76 ntBASIC1.42□□□□□ -2.18
Upf3aQ3ULJ3 Gm13729-201ENSMUST00000120328 406 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms