Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Gm22537-201ENSMUST00000158172 199 ntBASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Gm25707-201ENSMUST00000175120 96 ntBASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Gm27753-201ENSMUST00000184742 203 ntBASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Gm27540-201ENSMUST00000184950 187 ntBASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Mir1291-201ENSMUST00000199842 117 ntBASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Gm20144-201ENSMUST00000203031 165 ntBASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Gm25130-201ENSMUST00000082650 156 ntBASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Snora34-201ENSMUST00000083402 138 ntBASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.11□□□□□ -2.07
Nkx6-3Q3UHX8 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm23013-201ENSMUST00000104146 106 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Mir344e-201ENSMUST00000104677 66 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm22193-201ENSMUST00000116868 76 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm25961-201ENSMUST00000157174 135 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm23642-201ENSMUST00000157858 258 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm24769-201ENSMUST00000158506 129 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Mir6375-201ENSMUST00000197176 95 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Mir378a-201ENSMUST00000198300 66 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm24313-201ENSMUST00000082561 133 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm24661-201ENSMUST00000083205 104 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Gm24163-201ENSMUST00000093660 132 ntBASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Nkx6-3Q3UHX8 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm25875-201ENSMUST00000104323 107 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm24835-201ENSMUST00000116777 111 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm26156-201ENSMUST00000116999 123 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm14588-201ENSMUST00000119895 172 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm24385-201ENSMUST00000122694 350 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm22535-201ENSMUST00000158174 119 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm22258-201ENSMUST00000177645 94 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm26032-201ENSMUST00000178535 94 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm25210-201ENSMUST00000178813 94 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm25157-201ENSMUST00000178914 94 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm22046-201ENSMUST00000179027 94 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm22941-201ENSMUST00000179630 94 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm25471-201ENSMUST00000180126 94 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm28849-201ENSMUST00000188127 174 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm28330-201ENSMUST00000190353 171 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm44564-201ENSMUST00000207985 180 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm24355-201ENSMUST00000082858 122 ntBASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Nkx6-3Q3UHX8 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Gm23551-201ENSMUST00000116852 121 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Gm11786-201ENSMUST00000120799 155 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Gm26479-201ENSMUST00000122620 106 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Gm22951-201ENSMUST00000179471 107 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Mir6376-201ENSMUST00000185149 131 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Mir3069-201ENSMUST00000198802 65 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Gm44482-201ENSMUST00000199232 103 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Gm25124-201ENSMUST00000083345 164 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.08□□□□□ -2.08
Nkx6-3Q3UHX8 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm25094-201ENSMUST00000103992 131 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm22151-201ENSMUST00000116963 58 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm14792-201ENSMUST00000119725 258 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm24909-201ENSMUST00000157290 280 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm24010-201ENSMUST00000157731 282 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm25711-201ENSMUST00000158633 128 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Mir1936-201ENSMUST00000158699 93 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm25362-201ENSMUST00000158854 105 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm22093-201ENSMUST00000158980 111 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm16326-201ENSMUST00000162843 414 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm25253-201ENSMUST00000179958 107 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm29140-201ENSMUST00000190187 476 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Gm45791-201ENSMUST00000212908 352 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.07□□□□□ -2.08
Nkx6-3Q3UHX8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
Nkx6-3Q3UHX8 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Nkx6-3Q3UHX8 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Nkx6-3Q3UHX8 Gm26154-201ENSMUST00000102339 96 ntBASIC2.06□□□□□ -2.08
Nkx6-3Q3UHX8 Gm24049-201ENSMUST00000102409 100 ntBASIC2.06□□□□□ -2.08
Nkx6-3Q3UHX8 Gm22027-201ENSMUST00000122737 127 ntBASIC2.06□□□□□ -2.08
Nkx6-3Q3UHX8 Gm25115-201ENSMUST00000157187 140 ntBASIC2.06□□□□□ -2.08
Nkx6-3Q3UHX8 Gm22159-201ENSMUST00000158412 130 ntBASIC2.06□□□□□ -2.08
Nkx6-3Q3UHX8 Gm23977-201ENSMUST00000177871 74 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms