Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm14803-201ENSMUST00000117163 361 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm13729-201ENSMUST00000120328 406 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm25961-201ENSMUST00000157174 135 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm22551-201ENSMUST00000157795 103 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm25933-201ENSMUST00000178943 108 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm27898-201ENSMUST00000183987 80 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm43250-201ENSMUST00000196536 273 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm7214-201ENSMUST00000222428 272 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm23625-201ENSMUST00000082457 100 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Mir669i-201ENSMUST00000117007 127 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm13885-201ENSMUST00000117569 187 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm15692-201ENSMUST00000152173 352 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm25059-201ENSMUST00000157367 117 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm22447-201ENSMUST00000158155 92 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm22386-201ENSMUST00000158192 129 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm22114-201ENSMUST00000177756 107 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm26864-201ENSMUST00000181346 156 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Mir6352-201ENSMUST00000184495 116 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Mir6376-201ENSMUST00000185149 131 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm44429-201ENSMUST00000203542 186 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm45207-201ENSMUST00000207469 145 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trafd1Q3UDK1 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 Gm14761-201ENSMUST00000121363 262 ntBASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 Gm22598-201ENSMUST00000157600 127 ntBASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 Gm28288-201ENSMUST00000191019 214 ntBASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 Mir3087-201ENSMUST00000199405 56 ntBASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 Gm43865-201ENSMUST00000204721 127 ntBASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 Gm22062-201ENSMUST00000082563 107 ntBASIC1.72□□□□□ -2.13
Trafd1Q3UDK1 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Mir1b-201ENSMUST00000117012 122 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm15215-201ENSMUST00000117773 489 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm9059-201ENSMUST00000118319 183 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm13992-201ENSMUST00000120558 156 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm23214-201ENSMUST00000122716 157 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm24618-201ENSMUST00000177718 94 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm23953-201ENSMUST00000178214 94 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm24638-201ENSMUST00000179807 132 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm26332-201ENSMUST00000179813 94 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm22863-201ENSMUST00000180265 94 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm37338-201ENSMUST00000191986 127 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm25820-201ENSMUST00000198589 127 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm44482-201ENSMUST00000199232 103 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm44408-201ENSMUST00000200205 66 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm44858-201ENSMUST00000207360 154 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm25636-201ENSMUST00000082666 133 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Mir32-201ENSMUST00000083610 70 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm26107-201ENSMUST00000083972 107 ntBASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trafd1Q3UDK1 Gm6829-201ENSMUST00000119858 360 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm15281-201ENSMUST00000125181 351 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm24480-201ENSMUST00000157442 103 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm23535-201ENSMUST00000157542 106 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm25658-201ENSMUST00000158472 128 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm25996-201ENSMUST00000175393 117 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm24799-201ENSMUST00000178431 79 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm19901-201ENSMUST00000192191 495 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm43406-201ENSMUST00000200356 334 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm43993-201ENSMUST00000203972 247 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Gm22287-201ENSMUST00000083197 107 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Mir301-201ENSMUST00000083655 86 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.7□□□□□ -2.14
Trafd1Q3UDK1 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm12351-201ENSMUST00000118727 292 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm12647-201ENSMUST00000118977 265 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm24896-201ENSMUST00000122741 135 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm24629-201ENSMUST00000122762 89 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm22556-201ENSMUST00000157803 100 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Snord11-201ENSMUST00000158468 84 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm23921-201ENSMUST00000175258 107 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm20613-201ENSMUST00000175828 345 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm27905-201ENSMUST00000184005 207 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 Gm36891-201ENSMUST00000191995 655 ntBASIC1.69□□□□□ -2.14
Trafd1Q3UDK1 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms