Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Mir6391-201ENSMUST00000184391 104 ntBASIC4□□□□□ -1.77
Rnf40Q3U319 Gm8790-201ENSMUST00000194108 322 ntBASIC4□□□□□ -1.77
Rnf40Q3U319 Gm44464-201ENSMUST00000198010 138 ntBASIC4□□□□□ -1.77
Rnf40Q3U319 AC100590.2-201ENSMUST00000219028 215 ntBASIC4□□□□□ -1.77
Rnf40Q3U319 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4□□□□□ -1.77
Rnf40Q3U319 AC122327.1-201ENSMUST00000220778 108 ntBASIC4□□□□□ -1.77
Rnf40Q3U319 AL645546.1-201ENSMUST00000225001 189 ntBASIC4□□□□□ -1.77
Rnf40Q3U319 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Rnf40Q3U319 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4□□□□□ -1.77
Rnf40Q3U319 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Rnf40Q3U319 Gm42448-201ENSMUST00000197122 2644 ntBASIC4□□□□□ -1.77
Rnf40Q3U319 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Rnf40Q3U319 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm22678-201ENSMUST00000116974 101 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm24113-201ENSMUST00000157477 276 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm23906-201ENSMUST00000157573 128 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm26034-201ENSMUST00000158154 116 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm22129-201ENSMUST00000179034 107 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm27834-201ENSMUST00000183427 125 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm38311-201ENSMUST00000192945 165 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm24977-201ENSMUST00000083106 163 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.99□□□□□ -1.77
Rnf40Q3U319 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Rnf40Q3U319 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rnf40Q3U319 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm22473-201ENSMUST00000104114 132 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm7618-201ENSMUST00000121643 171 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.98□□□□□ -1.77
Rnf40Q3U319 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm23123-201ENSMUST00000157648 144 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm24905-201ENSMUST00000158129 104 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm24727-201ENSMUST00000158231 144 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm26435-201ENSMUST00000179026 107 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf40Q3U319 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm43899-201ENSMUST00000203675 246 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm44032-201ENSMUST00000204841 166 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm17829-201ENSMUST00000219782 344 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm22304-201ENSMUST00000082688 129 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Snora70-201ENSMUST00000083047 137 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Gm22972-201ENSMUST00000083297 131 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.98□□□□□ -1.77
Rnf40Q3U319 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rnf40Q3U319 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf40Q3U319 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rnf40Q3U319 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf40Q3U319 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Rnf40Q3U319 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Rnf40Q3U319 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Rnf40Q3U319 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Rnf40Q3U319 Gm25726-201ENSMUST00000104529 129 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 Gm22067-201ENSMUST00000122790 107 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 Gm24913-201ENSMUST00000157286 107 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 Gm24947-201ENSMUST00000158334 110 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 Gm23933-201ENSMUST00000178405 79 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 Gm22638-201ENSMUST00000179674 107 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 Mir6960-201ENSMUST00000183449 61 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 AC136457.1-201ENSMUST00000224195 156 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 Gm6030-201ENSMUST00000078768 402 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.97□□□□□ -1.77
Rnf40Q3U319 Gm25610-201ENSMUST00000104016 129 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm24280-201ENSMUST00000104237 134 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm13246-201ENSMUST00000120994 315 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm22796-201ENSMUST00000157234 106 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm24559-201ENSMUST00000157519 121 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm25908-201ENSMUST00000157624 98 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm23349-201ENSMUST00000158432 98 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm5829-201ENSMUST00000191383 351 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.96□□□□□ -1.78
Rnf40Q3U319 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm25513-201ENSMUST00000083861 162 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf40Q3U319 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.96□□□□□ -1.78
Rnf40Q3U319 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Rnf40Q3U319 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.95□□□□□ -1.78
Rnf40Q3U319 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Rnf40Q3U319 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.95□□□□□ -1.78
Rnf40Q3U319 Gm25112-201ENSMUST00000122680 104 ntBASIC3.95□□□□□ -1.78
Rnf40Q3U319 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.95□□□□□ -1.78
Rnf40Q3U319 Gm23099-201ENSMUST00000083454 139 ntBASIC3.95□□□□□ -1.78
Rnf40Q3U319 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Rnf40Q3U319 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf40Q3U319 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Rnf40Q3U319 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Rnf40Q3U319 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf40Q3U319 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms