Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm24623-201ENSMUST00000082616 194 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm24536-201ENSMUST00000083144 107 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm24615-201ENSMUST00000083268 113 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm25896-201ENSMUST00000083713 136 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Gm22136-201ENSMUST00000158751 268 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Gm23340-201ENSMUST00000158955 123 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Gm16038-201ENSMUST00000159317 193 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Gm34073-201ENSMUST00000195736 212 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Gm42857-201ENSMUST00000200823 339 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Gm25683-201ENSMUST00000083940 131 ntBASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.06□□□□□ -2.24
Trim43aQ3TL54 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.05□□□□□ -2.24
Trim43aQ3TL54 Gm23208-201ENSMUST00000158666 127 ntBASIC1.05□□□□□ -2.24
Trim43aQ3TL54 Gm25163-201ENSMUST00000158905 104 ntBASIC1.05□□□□□ -2.24
Trim43aQ3TL54 Gm22308-201ENSMUST00000177609 107 ntBASIC1.05□□□□□ -2.24
Trim43aQ3TL54 Gm24020-201ENSMUST00000180156 108 ntBASIC1.05□□□□□ -2.24
Trim43aQ3TL54 Gm29037-201ENSMUST00000189092 313 ntBASIC1.05□□□□□ -2.24
Trim43aQ3TL54 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.05□□□□□ -2.24
Trim43aQ3TL54 Gm44282-201ENSMUST00000203199 190 ntBASIC1.05□□□□□ -2.24
Trim43aQ3TL54 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.05□□□□□ -2.24
Trim43aQ3TL54 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Trim43aQ3TL54 Gm23448-201ENSMUST00000083151 104 ntBASIC1.05□□□□□ -2.24
Trim43aQ3TL54 Gm24431-201ENSMUST00000104073 66 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm23411-201ENSMUST00000157988 62 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm24942-201ENSMUST00000158328 114 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm19901-201ENSMUST00000192191 495 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm37658-201ENSMUST00000192672 315 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm35736-201ENSMUST00000203681 313 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm45315-201ENSMUST00000209283 333 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.04□□□□□ -2.24
Trim43aQ3TL54 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm25859-201ENSMUST00000083710 91 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.04□□□□□ -2.24
Trim43aQ3TL54 Gm24726-201ENSMUST00000158232 121 ntBASIC1.03□□□□□ -2.24
Trim43aQ3TL54 Gm17100-201ENSMUST00000168963 272 ntBASIC1.03□□□□□ -2.24
Trim43aQ3TL54 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.03□□□□□ -2.24
Trim43aQ3TL54 Mir6394-201ENSMUST00000184738 99 ntBASIC1.03□□□□□ -2.24
Trim43aQ3TL54 Gm23370-201ENSMUST00000199545 130 ntBASIC1.03□□□□□ -2.24
Trim43aQ3TL54 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trim43aQ3TL54 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.03□□□□□ -2.24
Trim43aQ3TL54 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.03□□□□□ -2.24
Trim43aQ3TL54 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.03□□□□□ -2.24
Trim43aQ3TL54 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Gm25507-201ENSMUST00000116981 144 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Gm11891-201ENSMUST00000121241 619 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Gm14766-201ENSMUST00000121689 367 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Gm25543-201ENSMUST00000122678 312 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Gm24901-201ENSMUST00000158125 110 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Gm38274-201ENSMUST00000195689 148 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Gm44491-201ENSMUST00000196794 96 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.02□□□□□ -2.25
Trim43aQ3TL54 Gm24630-201ENSMUST00000122768 106 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm24632-201ENSMUST00000122770 323 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm23390-201ENSMUST00000157393 106 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm25715-201ENSMUST00000158627 125 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm24668-201ENSMUST00000158935 104 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm24366-201ENSMUST00000175383 86 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm22565-201ENSMUST00000175540 69 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm29640-201ENSMUST00000187972 278 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm44830-201ENSMUST00000207667 584 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm25357-201ENSMUST00000082745 72 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.01□□□□□ -2.25
Trim43aQ3TL54 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Trim43aQ3TL54 Gm22834-201ENSMUST00000102021 79 ntBASIC1□□□□□ -2.25
Trim43aQ3TL54 Gm26074-201ENSMUST00000104063 129 ntBASIC1□□□□□ -2.25
Trim43aQ3TL54 Gm6829-201ENSMUST00000119858 360 ntBASIC1□□□□□ -2.25
Trim43aQ3TL54 Gm25102-201ENSMUST00000122479 112 ntBASIC1□□□□□ -2.25
Trim43aQ3TL54 Gm23535-201ENSMUST00000157542 106 ntBASIC1□□□□□ -2.25
Trim43aQ3TL54 Gm23557-201ENSMUST00000157820 138 ntBASIC1□□□□□ -2.25
Trim43aQ3TL54 Gm26038-201ENSMUST00000158151 106 ntBASIC1□□□□□ -2.25
Trim43aQ3TL54 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 171.3 ms