Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm28650-201ENSMUST00000188413 411 ntBASIC2.81□□□□□ -1.96
Usp39Q3TIX9 Gm44338-201ENSMUST00000198614 110 ntBASIC2.81□□□□□ -1.96
Usp39Q3TIX9 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.81□□□□□ -1.96
Usp39Q3TIX9 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.81□□□□□ -1.96
Usp39Q3TIX9 Gm45445-201ENSMUST00000209586 232 ntBASIC2.81□□□□□ -1.96
Usp39Q3TIX9 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.81□□□□□ -1.96
Usp39Q3TIX9 Gm22978-201ENSMUST00000082607 160 ntBASIC2.81□□□□□ -1.96
Usp39Q3TIX9 Mir208a-201ENSMUST00000083498 83 ntBASIC2.81□□□□□ -1.96
Usp39Q3TIX9 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.81□□□□□ -1.96
Usp39Q3TIX9 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
Usp39Q3TIX9 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm11356-201ENSMUST00000118974 192 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm26277-201ENSMUST00000157097 152 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm16111-201ENSMUST00000162128 285 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm29005-201ENSMUST00000186773 320 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm29308-201ENSMUST00000188863 315 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm28537-201ENSMUST00000189026 315 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm29631-201ENSMUST00000191065 315 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm37007-201ENSMUST00000194234 319 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm33866-201ENSMUST00000196911 289 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm42855-201ENSMUST00000197388 253 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm42988-201ENSMUST00000198116 225 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm30534-201ENSMUST00000217928 207 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Gm18617-201ENSMUST00000222311 259 ntBASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Usp39Q3TIX9 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Usp39Q3TIX9 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Usp39Q3TIX9 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Usp39Q3TIX9 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Usp39Q3TIX9 Gm14448-201ENSMUST00000116383 210 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 Gm12449-201ENSMUST00000117572 234 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 Gm11334-201ENSMUST00000121969 156 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 Mir6370-201ENSMUST00000183510 120 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 Gm27532-201ENSMUST00000183726 113 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 Gm44352-201ENSMUST00000196358 110 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.79□□□□□ -1.96
Usp39Q3TIX9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.79□□□□□ -1.96
Usp39Q3TIX9 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm11460-201ENSMUST00000118200 361 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm12143-201ENSMUST00000119666 332 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm12926-201ENSMUST00000121158 409 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm23470-201ENSMUST00000157129 120 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm23325-201ENSMUST00000157422 129 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm22139-201ENSMUST00000158747 105 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm16289-201ENSMUST00000162079 183 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm22853-201ENSMUST00000174974 131 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm23268-201ENSMUST00000175494 78 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Mir5136-201ENSMUST00000175573 76 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Mir6405-201ENSMUST00000184584 124 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm28825-201ENSMUST00000186233 238 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm28358-202ENSMUST00000189292 223 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Gm45116-201ENSMUST00000207392 275 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.78□□□□□ -1.96
Usp39Q3TIX9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm22003-201ENSMUST00000101885 107 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Snord14c-201ENSMUST00000101927 86 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Mir669b-201ENSMUST00000102172 97 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Mir1298-201ENSMUST00000116681 98 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm22560-201ENSMUST00000157332 120 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm24691-201ENSMUST00000157762 140 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm22075-201ENSMUST00000158599 192 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm16546-201ENSMUST00000159442 355 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm22756-201ENSMUST00000180118 107 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm18000-201ENSMUST00000212153 800 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm26054-201ENSMUST00000083037 107 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm24492-201ENSMUST00000083798 107 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.77□□□□□ -1.97
Usp39Q3TIX9 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Mir767-201ENSMUST00000103256 107 ntBASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Gm25961-201ENSMUST00000157174 135 ntBASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Gm22858-201ENSMUST00000174972 76 ntBASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Gm25457-201ENSMUST00000179509 107 ntBASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Gm24350-202ENSMUST00000198309 132 ntBASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.76□□□□□ -1.97
Usp39Q3TIX9 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Gm25136-201ENSMUST00000083253 115 ntBASIC2.76□□□□□ -1.97
Usp39Q3TIX9 Gm23727-201ENSMUST00000083352 164 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms