Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ssrp1Q08943 Gm23175-201ENSMUST00000104371 132 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ssrp1Q08943 Gm22141-201ENSMUST00000157403 277 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 Gm26088-201ENSMUST00000157896 131 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 Snord50b-201ENSMUST00000178497 72 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 Gm6801-201ENSMUST00000190697 339 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3□□□□□ -1.93
Ssrp1Q08943 Gm43563-201ENSMUST00000196761 198 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 Gm44482-201ENSMUST00000199232 103 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 Gm44182-201ENSMUST00000204052 115 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ssrp1Q08943 AC069074.2-201ENSMUST00000217819 428 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 AC154213.2-201ENSMUST00000227138 187 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ssrp1Q08943 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ssrp1Q08943 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3□□□□□ -1.93
Ssrp1Q08943 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.99□□□□□ -1.93
Ssrp1Q08943 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm23470-201ENSMUST00000157129 120 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm25280-201ENSMUST00000157269 101 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm22217-201ENSMUST00000157556 313 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm17161-201ENSMUST00000169187 524 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm24082-201ENSMUST00000175175 83 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm43521-201ENSMUST00000197838 255 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm43107-201ENSMUST00000198729 255 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm23461-201ENSMUST00000083265 107 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Gm25124-201ENSMUST00000083345 164 ntBASIC2.99□□□□□ -1.93
Ssrp1Q08943 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.99□□□□□ -1.93
Ssrp1Q08943 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Ssrp1Q08943 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ssrp1Q08943 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ssrp1Q08943 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ssrp1Q08943 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ssrp1Q08943 Snord72-201ENSMUST00000104549 81 ntBASIC2.98□□□□□ -1.93
Ssrp1Q08943 Gm24598-201ENSMUST00000122510 74 ntBASIC2.98□□□□□ -1.93
Ssrp1Q08943 Gm17052-201ENSMUST00000165496 289 ntBASIC2.98□□□□□ -1.93
Ssrp1Q08943 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ssrp1Q08943 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.98□□□□□ -1.93
Ssrp1Q08943 Gm17113-201ENSMUST00000170118 171 ntBASIC2.98□□□□□ -1.93
Ssrp1Q08943 Gm24304-201ENSMUST00000177635 107 ntBASIC2.98□□□□□ -1.93
Ssrp1Q08943 Gm23190-201ENSMUST00000180307 64 ntBASIC2.98□□□□□ -1.93
Ssrp1Q08943 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.98□□□□□ -1.93
Ssrp1Q08943 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ssrp1Q08943 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ssrp1Q08943 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ssrp1Q08943 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm25539-201ENSMUST00000116886 122 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm11285-201ENSMUST00000118443 322 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm22483-201ENSMUST00000157986 274 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm23858-201ENSMUST00000158384 106 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm23268-201ENSMUST00000175494 78 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm19257-201ENSMUST00000186121 183 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm29597-201ENSMUST00000188035 308 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm43264-201ENSMUST00000202284 325 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm45445-201ENSMUST00000209586 232 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm18346-201ENSMUST00000216782 325 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm19118-201ENSMUST00000222554 98 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Snora19-201ENSMUST00000082962 132 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm26493-201ENSMUST00000083155 136 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm23658-201ENSMUST00000083233 132 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Mir340-201ENSMUST00000083483 98 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm10360-201ENSMUST00000097219 272 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.97□□□□□ -1.93
Ssrp1Q08943 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ssrp1Q08943 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ssrp1Q08943 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Ssrp1Q08943 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm23324-201ENSMUST00000157421 131 ntBASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm25424-201ENSMUST00000157612 58 ntBASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm26215-201ENSMUST00000158584 139 ntBASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm22858-201ENSMUST00000174972 76 ntBASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm44564-201ENSMUST00000207985 180 ntBASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm45002-201ENSMUST00000208045 120 ntBASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm30534-201ENSMUST00000217928 207 ntBASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm10025-201ENSMUST00000079568 372 ntBASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm22248-201ENSMUST00000082482 150 ntBASIC2.96□□□□□ -1.94
Ssrp1Q08943 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Ssrp1Q08943 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ssrp1Q08943 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.95□□□□□ -1.94
Ssrp1Q08943 Gm26024-201ENSMUST00000158657 322 ntBASIC2.95□□□□□ -1.94
Ssrp1Q08943 Gm26435-201ENSMUST00000179026 107 ntBASIC2.95□□□□□ -1.94
Ssrp1Q08943 Gm27585-201ENSMUST00000183717 199 ntBASIC2.95□□□□□ -1.94
Ssrp1Q08943 Gm44256-201ENSMUST00000203304 335 ntBASIC2.95□□□□□ -1.94
Ssrp1Q08943 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.95□□□□□ -1.94
Ssrp1Q08943 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.95□□□□□ -1.94
Ssrp1Q08943 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Ssrp1Q08943 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 143.9 ms