Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm27793-201ENSMUST00000183405 76 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm28409-201ENSMUST00000187064 103 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Mir7657-201ENSMUST00000196051 57 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm44964-201ENSMUST00000207011 273 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.8□□□□□ -1.96
Col8a1Q00780 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm4945-201ENSMUST00000075152 453 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm26327-201ENSMUST00000093724 111 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col8a1Q00780 AC124562.2-201ENSMUST00000223888 2313 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Col8a1Q00780 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col8a1Q00780 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col8a1Q00780 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col8a1Q00780 Gm22105-201ENSMUST00000116734 116 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 Gm24787-201ENSMUST00000157380 123 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 Gm22586-201ENSMUST00000157507 122 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 Gm20672-201ENSMUST00000176605 261 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 Mir7068-201ENSMUST00000183439 74 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 Mir6370-201ENSMUST00000183510 120 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 Gm43587-201ENSMUST00000199590 204 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 Gm44524-201ENSMUST00000203899 271 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.79□□□□□ -1.96
Col8a1Q00780 Gm5175-202ENSMUST00000219699 529 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.79□□□□□ -1.96
Col8a1Q00780 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col8a1Q00780 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col8a1Q00780 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col8a1Q00780 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Col8a1Q00780 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col8a1Q00780 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col8a1Q00780 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22939-201ENSMUST00000103958 131 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm23772-201ENSMUST00000104433 102 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm12351-201ENSMUST00000118727 292 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm23655-201ENSMUST00000122627 105 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm23257-201ENSMUST00000158322 132 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22429-201ENSMUST00000158553 130 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25098-201ENSMUST00000177580 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm23356-201ENSMUST00000177610 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm24027-201ENSMUST00000177611 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22511-201ENSMUST00000177628 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22630-201ENSMUST00000177781 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm23560-201ENSMUST00000177782 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25462-201ENSMUST00000177833 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm26059-201ENSMUST00000177865 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22255-201ENSMUST00000177933 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25146-201ENSMUST00000177976 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25523-201ENSMUST00000178044 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm24585-201ENSMUST00000178104 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22627-201ENSMUST00000178127 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22912-201ENSMUST00000178242 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm24866-201ENSMUST00000178338 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22524-201ENSMUST00000178357 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25710-201ENSMUST00000178367 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm23575-201ENSMUST00000178406 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm24872-201ENSMUST00000178434 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25646-201ENSMUST00000178527 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22449-201ENSMUST00000178924 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm24702-201ENSMUST00000178965 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm24206-201ENSMUST00000179011 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Mir669j-201ENSMUST00000179023 121 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm24528-201ENSMUST00000179164 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm22909-201ENSMUST00000179190 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm26334-201ENSMUST00000179403 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25463-201ENSMUST00000179405 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25742-201ENSMUST00000179530 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25209-201ENSMUST00000179576 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm26392-201ENSMUST00000179661 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25230-201ENSMUST00000179740 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm26434-201ENSMUST00000179778 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm25741-201ENSMUST00000179825 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm24759-201ENSMUST00000179827 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm24219-201ENSMUST00000179861 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm29604-201ENSMUST00000187176 163 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm42834-201ENSMUST00000196845 256 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Gm23254-201ENSMUST00000097244 79 ntBASIC2.78□□□□□ -1.96
Col8a1Q00780 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Col8a1Q00780 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col8a1Q00780 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col8a1Q00780 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Col8a1Q00780 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.97
Col8a1Q00780 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.78□□□□□ -1.97
Col8a1Q00780 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Col8a1Q00780 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col8a1Q00780 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col8a1Q00780 Gm24232-201ENSMUST00000104314 132 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Gm25753-201ENSMUST00000116792 121 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Gm11786-201ENSMUST00000120799 155 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Gm25270-201ENSMUST00000122606 138 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Gm22850-201ENSMUST00000157714 82 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Gm7592-201ENSMUST00000160674 627 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Mir6371-201ENSMUST00000184470 111 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms