Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm44408-201ENSMUST00000200205 66 ntBASIC2.5□□□□□ -2.01
Lig3P97386 Gm43978-201ENSMUST00000203491 451 ntBASIC2.5□□□□□ -2.01
Lig3P97386 Gm44010-201ENSMUST00000204432 331 ntBASIC2.5□□□□□ -2.01
Lig3P97386 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.5□□□□□ -2.01
Lig3P97386 Gm9795-201ENSMUST00000062156 693 ntBASIC2.5□□□□□ -2.01
Lig3P97386 Gm25651-201ENSMUST00000083782 119 ntBASIC2.5□□□□□ -2.01
Lig3P97386 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.5□□□□□ -2.01
Lig3P97386 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Lig3P97386 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Lig3P97386 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Lig3P97386 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Lig3P97386 Gm23472-201ENSMUST00000101806 191 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm12513-201ENSMUST00000118617 352 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm12797-201ENSMUST00000118645 273 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm22984-201ENSMUST00000122751 122 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.49□□□□□ -2.01
Lig3P97386 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.49□□□□□ -2.01
Lig3P97386 Gm24053-201ENSMUST00000158620 105 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm25749-201ENSMUST00000175485 111 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm24497-201ENSMUST00000177868 191 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm27699-201ENSMUST00000183553 180 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm27803-201ENSMUST00000183763 119 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm27898-201ENSMUST00000183987 80 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm37579-201ENSMUST00000194291 142 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm37361-201ENSMUST00000194345 132 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm23370-202ENSMUST00000197008 129 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Mir497-201ENSMUST00000200557 84 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.49□□□□□ -2.01
Lig3P97386 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm7214-201ENSMUST00000222428 272 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Lig3P97386 Gm22620-201ENSMUST00000082700 133 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm23517-201ENSMUST00000082830 192 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm23444-201ENSMUST00000082922 191 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm23453-201ENSMUST00000083326 106 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.49□□□□□ -2.01
Lig3P97386 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Lig3P97386 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Gm14838-201ENSMUST00000118913 248 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Gm22348-201ENSMUST00000178674 79 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Lig3P97386 Gm27545-201ENSMUST00000184755 202 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Lig3P97386 Gm43402-201ENSMUST00000197159 159 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.48□□□□□ -2.01
Lig3P97386 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.48□□□□□ -2.01
Lig3P97386 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Lig3P97386 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Lig3P97386 Gm23841-201ENSMUST00000116951 114 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm15714-201ENSMUST00000117168 250 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm6954-201ENSMUST00000117416 225 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm26479-201ENSMUST00000122620 106 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm2830-201ENSMUST00000140330 385 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm25720-201ENSMUST00000157503 105 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm23640-201ENSMUST00000157860 104 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm25121-201ENSMUST00000179846 79 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm28453-203ENSMUST00000187041 189 ntBASIC2.47□□□□□ -2.01
Lig3P97386 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm29657-201ENSMUST00000189807 342 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm43193-201ENSMUST00000197732 441 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm22062-201ENSMUST00000082563 107 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Mir222-201ENSMUST00000083537 79 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.47□□□□□ -2.01
Lig3P97386 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.47□□□□□ -2.01
Lig3P97386 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.46□□□□□ -2.01
Lig3P97386 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
Lig3P97386 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.46□□□□□ -2.01
Lig3P97386 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Lig3P97386 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Lig3P97386 Gm23060-201ENSMUST00000102345 109 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Gm22083-201ENSMUST00000157586 102 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Gm25384-201ENSMUST00000157807 105 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Gm22447-201ENSMUST00000158155 92 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Gm24212-201ENSMUST00000158258 132 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Gm25654-201ENSMUST00000158467 88 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Gm17100-201ENSMUST00000168963 272 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.46□□□□□ -2.02
Lig3P97386 Gm9251-201ENSMUST00000197202 628 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Mir3535-201ENSMUST00000197651 147 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.46□□□□□ -2.02
Lig3P97386 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.46□□□□□ -2.02
Lig3P97386 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.46□□□□□ -2.02
Lig3P97386 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.46□□□□□ -2.02
Lig3P97386 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Lig3P97386 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Lig3P97386 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Lig3P97386 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lig3P97386 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Lig3P97386 Gm6444-201ENSMUST00000119611 458 ntBASIC2.45□□□□□ -2.02
Lig3P97386 Gm14846-201ENSMUST00000121868 216 ntBASIC2.45□□□□□ -2.02
Lig3P97386 Gm14629-201ENSMUST00000122428 144 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms