Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.35□□□□□ -2.35
Cux1P53564 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Cux1P53564 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.34□□□□□ -2.35
Cux1P53564 Mir687-201ENSMUST00000102166 89 ntBASIC0.34□□□□□ -2.35
Cux1P53564 Gm22796-201ENSMUST00000157234 106 ntBASIC0.34□□□□□ -2.35
Cux1P53564 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.34□□□□□ -2.35
Cux1P53564 Gm25361-201ENSMUST00000179358 76 ntBASIC0.34□□□□□ -2.35
Cux1P53564 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.34□□□□□ -2.35
Cux1P53564 Gm18971-201ENSMUST00000197240 374 ntBASIC0.34□□□□□ -2.35
Cux1P53564 Gm25851-201ENSMUST00000082794 107 ntBASIC0.34□□□□□ -2.35
Cux1P53564 Gm10780-201ENSMUST00000099459 285 ntBASIC0.34□□□□□ -2.35
Cux1P53564 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
Cux1P53564 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.34□□□□□ -2.36
Cux1P53564 Gm25876-201ENSMUST00000104329 119 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm14713-201ENSMUST00000122362 686 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC0.33□□□□□ -2.36
Cux1P53564 Gm22802-201ENSMUST00000175621 89 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm44976-201ENSMUST00000205543 261 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm25357-201ENSMUST00000082745 72 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm25650-201ENSMUST00000083784 162 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Mir467h-201ENSMUST00000116759 121 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm11849-201ENSMUST00000121293 261 ntBASIC0.33□□□□□ -2.36
Cux1P53564 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Cux1P53564 Gm23036-201ENSMUST00000157885 99 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm20543-201ENSMUST00000174200 726 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm22263-201ENSMUST00000180060 104 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm37923-201ENSMUST00000191624 161 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm37713-201ENSMUST00000191746 198 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Gm38395-201ENSMUST00000199904 830 ntBASIC0.33□□□□□ -2.36
Cux1P53564 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Cux1P53564 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.32□□□□□ -2.36
Cux1P53564 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.32□□□□□ -2.36
Cux1P53564 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Cux1P53564 Gm25088-201ENSMUST00000101803 79 ntBASIC0.32□□□□□ -2.36
Cux1P53564 Gm24271-201ENSMUST00000102327 111 ntBASIC0.32□□□□□ -2.36
Cux1P53564 Gm16053-201ENSMUST00000120511 188 ntBASIC0.32□□□□□ -2.36
Cux1P53564 Gm29661-201ENSMUST00000186781 315 ntBASIC0.32□□□□□ -2.36
Cux1P53564 Gm29308-201ENSMUST00000188863 315 ntBASIC0.32□□□□□ -2.36
Cux1P53564 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.32□□□□□ -2.36
Cux1P53564 Gm23744-201ENSMUST00000104231 149 ntBASIC0.31□□□□□ -2.36
Cux1P53564 Gm25378-201ENSMUST00000104333 129 ntBASIC0.31□□□□□ -2.36
Cux1P53564 Gm12105-201ENSMUST00000120846 779 ntBASIC0.31□□□□□ -2.36
Cux1P53564 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Cux1P53564 Gm27421-201ENSMUST00000184729 167 ntBASIC0.31□□□□□ -2.36
Cux1P53564 Gm37709-201ENSMUST00000195074 600 ntBASIC0.31□□□□□ -2.36
Cux1P53564 Gm17911-201ENSMUST00000210806 877 ntBASIC0.31□□□□□ -2.36
Cux1P53564 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.31□□□□□ -2.36
Cux1P53564 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.31□□□□□ -2.36
Cux1P53564 Mir340-201ENSMUST00000083483 98 ntBASIC0.31□□□□□ -2.36
Cux1P53564 Gm25047-201ENSMUST00000122667 104 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Gm25543-201ENSMUST00000122678 312 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Gm25956-201ENSMUST00000175115 217 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Mir15a-201ENSMUST00000175266 84 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Gm24464-201ENSMUST00000179697 107 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Gm26914-201ENSMUST00000182262 223 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Gm37869-201ENSMUST00000193385 595 ntBASIC0.3□□□□□ -2.36
Cux1P53564 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Gm24311-201ENSMUST00000082570 104 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Gm24018-201ENSMUST00000083232 107 ntBASIC0.3□□□□□ -2.36
Cux1P53564 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.3□□□□□ -2.36
Cux1P53564 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
Cux1P53564 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC0.29□□□□□ -2.36
Cux1P53564 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Cux1P53564 Gm24481-201ENSMUST00000157210 102 ntBASIC0.29□□□□□ -2.36
Cux1P53564 Gm22817-201ENSMUST00000157448 356 ntBASIC0.29□□□□□ -2.36
Cux1P53564 Gm2962-201ENSMUST00000159266 336 ntBASIC0.29□□□□□ -2.36
Cux1P53564 Gm22290-201ENSMUST00000177655 107 ntBASIC0.29□□□□□ -2.36
Cux1P53564 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.29□□□□□ -2.36
Cux1P53564 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Cux1P53564 Platr25-208ENSMUST00000222602 939 ntBASIC0.29□□□□□ -2.36
Cux1P53564 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.29□□□□□ -2.36
Cux1P53564 Gm22193-201ENSMUST00000116868 76 ntBASIC0.28□□□□□ -2.36
Cux1P53564 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.28□□□□□ -2.36
Cux1P53564 Gm22668-201ENSMUST00000158716 260 ntBASIC0.28□□□□□ -2.36
Cux1P53564 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.28□□□□□ -2.36
Cux1P53564 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.28□□□□□ -2.36
Cux1P53564 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Cux1P53564 Gm29022-201ENSMUST00000190702 225 ntBASIC0.28□□□□□ -2.36
Cux1P53564 Gm34073-201ENSMUST00000195736 212 ntBASIC0.28□□□□□ -2.36
Cux1P53564 Gm44491-201ENSMUST00000196794 96 ntBASIC0.28□□□□□ -2.36
Cux1P53564 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.28□□□□□ -2.36
Cux1P53564 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.28□□□□□ -2.36
Cux1P53564 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.28□□□□□ -2.36
Cux1P53564 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.28□□□□□ -2.37
Cux1P53564 Gm23184-201ENSMUST00000122594 131 ntBASIC0.28□□□□□ -2.37
Cux1P53564 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.28□□□□□ -2.37
Cux1P53564 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.28□□□□□ -2.37
Cux1P53564 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.28□□□□□ -2.37
Cux1P53564 Gm5116-201ENSMUST00000187732 463 ntBASIC0.28□□□□□ -2.37
Cux1P53564 Gm29627-201ENSMUST00000187984 463 ntBASIC0.28□□□□□ -2.37
Cux1P53564 Gm43602-201ENSMUST00000196772 300 ntBASIC0.28□□□□□ -2.37
Cux1P53564 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.28□□□□□ -2.37
Cux1P53564 AC168880.1-201ENSMUST00000225113 707 ntBASIC0.28□□□□□ -2.37
Cux1P53564 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.28□□□□□ -2.37
Cux1P53564 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.27□□□□□ -2.37
Cux1P53564 Gm12102-201ENSMUST00000118251 604 ntBASIC0.27□□□□□ -2.37
Cux1P53564 Gm25269-201ENSMUST00000122601 104 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms