Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm46389-201ENSMUST00000223199 392 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.58□□□□□ -2
Ercc3P49135 Gm23941-201ENSMUST00000101953 107 ntBASIC2.58□□□□□ -2
Ercc3P49135 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ercc3P49135 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.58□□□□□ -2
Ercc3P49135 Gm23232-201ENSMUST00000157300 105 ntBASIC2.58□□□□□ -2
Ercc3P49135 Gm23759-201ENSMUST00000158351 268 ntBASIC2.58□□□□□ -2
Ercc3P49135 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.58□□□□□ -2
Ercc3P49135 Gm29167-201ENSMUST00000190024 377 ntBASIC2.58□□□□□ -2
Ercc3P49135 Gm36891-201ENSMUST00000191995 655 ntBASIC2.58□□□□□ -2
Ercc3P49135 Gm36946-201ENSMUST00000192706 435 ntBASIC2.58□□□□□ -2
Ercc3P49135 Mir3970-201ENSMUST00000199287 90 ntBASIC2.58□□□□□ -2
Ercc3P49135 Gm44473-201ENSMUST00000204039 152 ntBASIC2.58□□□□□ -2
Ercc3P49135 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.58□□□□□ -2
Ercc3P49135 Gm26447-201ENSMUST00000082448 129 ntBASIC2.58□□□□□ -2
Ercc3P49135 Gm23423-201ENSMUST00000082782 106 ntBASIC2.58□□□□□ -2
Ercc3P49135 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.57□□□□□ -2
Ercc3P49135 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Ercc3P49135 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.57□□□□□ -2
Ercc3P49135 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.57□□□□□ -2
Ercc3P49135 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.57□□□□□ -2
Ercc3P49135 Gm16561-201ENSMUST00000163001 192 ntBASIC2.57□□□□□ -2
Ercc3P49135 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.57□□□□□ -2
Ercc3P49135 Gm42594-201ENSMUST00000199511 246 ntBASIC2.57□□□□□ -2
Ercc3P49135 Gm24152-201ENSMUST00000082764 163 ntBASIC2.57□□□□□ -2
Ercc3P49135 Mir30d-201ENSMUST00000083503 82 ntBASIC2.57□□□□□ -2
Ercc3P49135 Gm23845-201ENSMUST00000083834 152 ntBASIC2.57□□□□□ -2
Ercc3P49135 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Ercc3P49135 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ercc3P49135 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.57□□□□□ -2
Ercc3P49135 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.57□□□□□ -2
Ercc3P49135 Gm13725-201ENSMUST00000122139 207 ntBASIC2.56□□□□□ -2
Ercc3P49135 Gm24630-201ENSMUST00000122768 106 ntBASIC2.56□□□□□ -2
Ercc3P49135 Gm24858-201ENSMUST00000158058 323 ntBASIC2.56□□□□□ -2
Ercc3P49135 Gm16326-201ENSMUST00000162843 414 ntBASIC2.56□□□□□ -2
Ercc3P49135 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ercc3P49135 Gm18357-201ENSMUST00000188184 580 ntBASIC2.56□□□□□ -2
Ercc3P49135 Gm37377-201ENSMUST00000191733 304 ntBASIC2.56□□□□□ -2
Ercc3P49135 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.56□□□□□ -2
Ercc3P49135 AC125020.2-201ENSMUST00000218894 348 ntBASIC2.56□□□□□ -2
Ercc3P49135 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ercc3P49135 Mir93-201ENSMUST00000083593 88 ntBASIC2.56□□□□□ -2
Ercc3P49135 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ercc3P49135 Gm22193-201ENSMUST00000116868 76 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm12926-201ENSMUST00000121158 409 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ercc3P49135 Gm22814-201ENSMUST00000157452 104 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm22083-201ENSMUST00000157586 102 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm25368-201ENSMUST00000158847 131 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm23355-201ENSMUST00000177614 107 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm23148-201ENSMUST00000180367 107 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm27997-201ENSMUST00000184942 69 ntBASIC2.55□□□□□ -2
Ercc3P49135 Mir7226-201ENSMUST00000184953 60 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.55□□□□□ -2
Ercc3P49135 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ercc3P49135 Gm37713-201ENSMUST00000191746 198 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm45005-201ENSMUST00000206640 157 ntBASIC2.55□□□□□ -2
Ercc3P49135 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm23055-201ENSMUST00000082805 94 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm25258-201ENSMUST00000083049 107 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm26175-201ENSMUST00000083794 131 ntBASIC2.55□□□□□ -2
Ercc3P49135 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.55□□□□□ -2
Ercc3P49135 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ercc3P49135 Gm24629-201ENSMUST00000122762 89 ntBASIC2.54□□□□□ -2
Ercc3P49135 Gm23858-201ENSMUST00000158384 106 ntBASIC2.54□□□□□ -2
Ercc3P49135 Gm24501-201ENSMUST00000158452 62 ntBASIC2.54□□□□□ -2
Ercc3P49135 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.54□□□□□ -2
Ercc3P49135 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.54□□□□□ -2
Ercc3P49135 Gm37801-201ENSMUST00000194754 274 ntBASIC2.54□□□□□ -2
Ercc3P49135 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ercc3P49135 Gm43587-201ENSMUST00000199590 204 ntBASIC2.54□□□□□ -2
Ercc3P49135 Mir322-201ENSMUST00000083484 95 ntBASIC2.54□□□□□ -2
Ercc3P49135 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.54□□□□□ -2
Ercc3P49135 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.53□□□□□ -2
Ercc3P49135 Gm11572-201ENSMUST00000119164 120 ntBASIC2.53□□□□□ -2
Ercc3P49135 Gm25805-201ENSMUST00000122788 108 ntBASIC2.53□□□□□ -2
Ercc3P49135 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ercc3P49135 Gm23581-201ENSMUST00000158531 63 ntBASIC2.53□□□□□ -2
Ercc3P49135 Gm42960-201ENSMUST00000202160 241 ntBASIC2.53□□□□□ -2
Ercc3P49135 Gm43865-201ENSMUST00000204721 127 ntBASIC2.53□□□□□ -2
Ercc3P49135 Gm44655-201ENSMUST00000207768 423 ntBASIC2.53□□□□□ -2
Ercc3P49135 Gm45296-201ENSMUST00000209625 205 ntBASIC2.53□□□□□ -2
Ercc3P49135 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.53□□□□□ -2
Ercc3P49135 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.53□□□□□ -2
Ercc3P49135 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Ercc3P49135 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ercc3P49135 Gm23951-201ENSMUST00000104029 132 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Gm12941-201ENSMUST00000117934 220 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Gm14782-201ENSMUST00000120151 195 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ercc3P49135 Gm23469-201ENSMUST00000157131 104 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Gm24010-201ENSMUST00000157731 282 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Gm23474-201ENSMUST00000158884 75 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Gm22093-201ENSMUST00000158980 111 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Gm20438-201ENSMUST00000174441 329 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Gm7258-201ENSMUST00000179317 300 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms