Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm27249-201ENSMUST00000185049 328 ntBASIC3.61□□□□□ -1.83
Rfx1P48377 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.61□□□□□ -1.83
Rfx1P48377 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.61□□□□□ -1.83
Rfx1P48377 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rfx1P48377 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.61□□□□□ -1.83
Rfx1P48377 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Rfx1P48377 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rfx1P48377 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Rfx1P48377 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rfx1P48377 Gm25168-201ENSMUST00000104189 132 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Gm26018-201ENSMUST00000104406 128 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Gm26277-201ENSMUST00000157097 152 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Gm24008-201ENSMUST00000157733 138 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Mir7062-201ENSMUST00000185038 66 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Gm37428-201ENSMUST00000193886 137 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Gm44600-201ENSMUST00000208540 111 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Gm45245-201ENSMUST00000210082 376 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Gm22979-201ENSMUST00000082609 159 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Gm24615-201ENSMUST00000083268 113 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Gm10161-201ENSMUST00000091506 204 ntBASIC3.6□□□□□ -1.83
Rfx1P48377 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rfx1P48377 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Rfx1P48377 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rfx1P48377 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Rfx1P48377 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.59□□□□□ -1.83
Rfx1P48377 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.59□□□□□ -1.83
Rfx1P48377 Gm23015-201ENSMUST00000104145 128 ntBASIC3.59□□□□□ -1.83
Rfx1P48377 Gm25376-201ENSMUST00000104340 133 ntBASIC3.59□□□□□ -1.83
Rfx1P48377 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.59□□□□□ -1.83
Rfx1P48377 Gm26105-201ENSMUST00000157253 190 ntBASIC3.59□□□□□ -1.83
Rfx1P48377 Gm29602-201ENSMUST00000186887 442 ntBASIC3.59□□□□□ -1.83
Rfx1P48377 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Rfx1P48377 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Rfx1P48377 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.59□□□□□ -1.84
Rfx1P48377 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Rfx1P48377 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Rfx1P48377 Gm24276-201ENSMUST00000102181 110 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Rfx1P48377 Gm26100-201ENSMUST00000157245 127 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Gm26099-201ENSMUST00000157248 109 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Gm23230-201ENSMUST00000157298 133 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Gm23667-201ENSMUST00000157466 120 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Gm23895-201ENSMUST00000158108 160 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Gm26435-201ENSMUST00000179026 107 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Rfx1P48377 Gm44824-201ENSMUST00000207021 229 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Rfx1P48377 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Rfx1P48377 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.58□□□□□ -1.84
Rfx1P48377 Gm23324-201ENSMUST00000157421 131 ntBASIC3.57□□□□□ -1.84
Rfx1P48377 Gm24277-201ENSMUST00000158661 104 ntBASIC3.57□□□□□ -1.84
Rfx1P48377 Gm23194-201ENSMUST00000158813 105 ntBASIC3.57□□□□□ -1.84
Rfx1P48377 Gm17117-201ENSMUST00000163665 299 ntBASIC3.57□□□□□ -1.84
Rfx1P48377 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.57□□□□□ -1.84
Rfx1P48377 Gm45456-201ENSMUST00000210841 243 ntBASIC3.57□□□□□ -1.84
Rfx1P48377 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Rfx1P48377 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Rfx1P48377 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.57□□□□□ -1.84
Rfx1P48377 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.57□□□□□ -1.84
Rfx1P48377 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Rfx1P48377 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.57□□□□□ -1.84
Rfx1P48377 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Rfx1P48377 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Rfx1P48377 Gm25272-201ENSMUST00000104293 128 ntBASIC3.56□□□□□ -1.84
Rfx1P48377 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Rfx1P48377 Gm22476-201ENSMUST00000158902 100 ntBASIC3.56□□□□□ -1.84
Rfx1P48377 Gm25835-201ENSMUST00000158917 144 ntBASIC3.56□□□□□ -1.84
Rfx1P48377 Gm16111-201ENSMUST00000162128 285 ntBASIC3.56□□□□□ -1.84
Rfx1P48377 Gm6801-201ENSMUST00000190697 339 ntBASIC3.56□□□□□ -1.84
Rfx1P48377 Gm24533-201ENSMUST00000083138 196 ntBASIC3.56□□□□□ -1.84
Rfx1P48377 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.56□□□□□ -1.84
Rfx1P48377 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Rfx1P48377 Mir499-201ENSMUST00000102357 79 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Gm14973-201ENSMUST00000117248 255 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Gm12723-201ENSMUST00000120700 451 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Gm25961-201ENSMUST00000157174 135 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Gm24510-201ENSMUST00000174965 94 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Gm32381-201ENSMUST00000203192 476 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Gm43991-201ENSMUST00000203751 274 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Rfx1P48377 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Rfx1P48377 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.55□□□□□ -1.84
Rfx1P48377 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Rfx1P48377 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.54□□□□□ -1.84
Rfx1P48377 Gm22590-201ENSMUST00000104247 128 ntBASIC3.54□□□□□ -1.84
Rfx1P48377 Gm11598-201ENSMUST00000119257 357 ntBASIC3.54□□□□□ -1.84
Rfx1P48377 Gm6788-201ENSMUST00000166459 270 ntBASIC3.54□□□□□ -1.84
Rfx1P48377 Gm44084-201ENSMUST00000203947 409 ntBASIC3.54□□□□□ -1.84
Rfx1P48377 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms