Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm25332-201ENSMUST00000158038 105 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm25020-201ENSMUST00000178071 107 ntBASIC-0.49□□□□□ -2.49
HttP42859 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm23897-201ENSMUST00000158110 158 ntBASIC-0.5□□□□□ -2.49
HttP42859 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
HttP42859 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.5□□□□□ -2.49
HttP42859 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.5□□□□□ -2.49
HttP42859 Gm20102-201ENSMUST00000222445 220 ntBASIC-0.5□□□□□ -2.49
HttP42859 AC104832.1-201ENSMUST00000222938 550 ntBASIC-0.5□□□□□ -2.49
HttP42859 AC163660.3-201ENSMUST00000224253 1563 ntBASIC-0.5□□□□□ -2.49
HttP42859 Gm16412-201ENSMUST00000121602 273 ntBASIC-0.5□□□□□ -2.49
HttP42859 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.5□□□□□ -2.49
HttP42859 CT485612.4-201ENSMUST00000223405 250 ntBASIC-0.5□□□□□ -2.49
HttP42859 AC173482.5-201ENSMUST00000224181 327 ntBASIC-0.5□□□□□ -2.49
HttP42859 Gm13454-201ENSMUST00000118166 483 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm29640-201ENSMUST00000187972 278 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm28956-201ENSMUST00000189047 427 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm18410-201ENSMUST00000207199 577 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm35262-201ENSMUST00000215133 267 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm26206-201ENSMUST00000082908 110 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm14594-201ENSMUST00000118052 537 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm14590-201ENSMUST00000118934 537 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC-0.51□□□□□ -2.49
HttP42859 Gm24552-201ENSMUST00000158646 103 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm15508-201ENSMUST00000160330 325 ntBASIC-0.51□□□□□ -2.49
HttP42859 Ear-ps8-201ENSMUST00000161935 354 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm14596-201ENSMUST00000180268 537 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm14595-201ENSMUST00000180335 537 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm37757-201ENSMUST00000193072 210 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm32300-201ENSMUST00000221735 515 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm5955-201ENSMUST00000222712 219 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm30155-201ENSMUST00000223458 339 ntBASIC-0.51□□□□□ -2.49
HttP42859 Gm16400-201ENSMUST00000116523 1029 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm15177-201ENSMUST00000120491 577 ntBASIC-0.52□□□□□ -2.49
HttP42859 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm10074-201ENSMUST00000174543 249 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm43220-201ENSMUST00000199299 282 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm14852-201ENSMUST00000120065 647 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC-0.52□□□□□ -2.49
HttP42859 Gm36984-201ENSMUST00000192770 235 ntBASIC-0.52□□□□□ -2.49
HttP42859 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC-0.52□□□□□ -2.49
HttP42859 n-R5s216-201ENSMUST00000122755 112 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm25243-201ENSMUST00000174912 207 ntBASIC-0.53□□□□□ -2.49
HttP42859 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC-0.53□□□□□ -2.49
HttP42859 Snora62-201ENSMUST00000082991 149 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.53□□□□□ -2.49
HttP42859 Mir18-201ENSMUST00000083469 96 ntBASIC-0.53□□□□□ -2.49
HttP42859 Mir3061-201ENSMUST00000175129 91 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm23932-201ENSMUST00000082914 107 ntBASIC-0.53□□□□□ -2.49
HttP42859 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.53□□□□□ -2.49
HttP42859 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
HttP42859 Gm15223-201ENSMUST00000120989 826 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm25956-201ENSMUST00000175115 217 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm38149-201ENSMUST00000191943 339 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm37128-201ENSMUST00000192599 232 ntBASIC-0.53□□□□□ -2.49
HttP42859 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC-0.53□□□□□ -2.49
HttP42859 AC167202.1-201ENSMUST00000219027 331 ntBASIC-0.53□□□□□ -2.49
HttP42859 Mir293-201ENSMUST00000104841 80 ntBASIC-0.54□□□□□ -2.5
HttP42859 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC-0.54□□□□□ -2.5
HttP42859 Gm24997-201ENSMUST00000157910 105 ntBASIC-0.54□□□□□ -2.5
HttP42859 Gm24002-201ENSMUST00000158456 104 ntBASIC-0.54□□□□□ -2.5
HttP42859 Gm28409-201ENSMUST00000187064 103 ntBASIC-0.54□□□□□ -2.5
HttP42859 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC-0.54□□□□□ -2.5
HttP42859 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC-0.54□□□□□ -2.5
HttP42859 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC-0.54□□□□□ -2.5
HttP42859 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC-0.54□□□□□ -2.5
HttP42859 Gm37693-201ENSMUST00000194562 234 ntBASIC-0.54□□□□□ -2.5
HttP42859 Mir468-201ENSMUST00000197332 78 ntBASIC-0.54□□□□□ -2.5
HttP42859 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm14629-201ENSMUST00000122428 144 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm22403-201ENSMUST00000174919 84 ntBASIC-0.55□□□□□ -2.5
HttP42859 Mir28b-201ENSMUST00000175399 80 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm21673-201ENSMUST00000186640 436 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm21135-201ENSMUST00000189023 436 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.55□□□□□ -2.5
HttP42859 Mir374b-201ENSMUST00000102314 95 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm44396-201ENSMUST00000199843 114 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm25792-201ENSMUST00000083289 100 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm24366-201ENSMUST00000175383 86 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm23090-201ENSMUST00000177331 78 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms