Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm44149-201ENSMUST00000204256 226 ntBASIC1.97□□□□□ -2.09
Traf1P39428 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.97□□□□□ -2.09
Traf1P39428 Gm25636-201ENSMUST00000082666 133 ntBASIC1.97□□□□□ -2.09
Traf1P39428 Gm42606-201ENSMUST00000114209 239 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Gm11862-201ENSMUST00000119678 659 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Gm25279-201ENSMUST00000122608 133 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Gm24499-201ENSMUST00000158446 104 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Rnu7-201ENSMUST00000158458 62 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Gm16162-201ENSMUST00000162296 297 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Gm26435-201ENSMUST00000179026 107 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Mir6388-201ENSMUST00000184417 75 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Mir7241-201ENSMUST00000184532 64 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Gm10105-201ENSMUST00000184601 270 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Gm44811-201ENSMUST00000209120 228 ntBASIC1.96□□□□□ -2.1
Traf1P39428 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.96□□□□□ -2.1
Traf1P39428 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Traf1P39428 Gm11854-201ENSMUST00000117839 446 ntBASIC1.95□□□□□ -2.1
Traf1P39428 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.95□□□□□ -2.1
Traf1P39428 Gm25333-201ENSMUST00000158035 246 ntBASIC1.95□□□□□ -2.1
Traf1P39428 Gm23854-201ENSMUST00000158378 108 ntBASIC1.95□□□□□ -2.1
Traf1P39428 Gm26405-201ENSMUST00000158495 100 ntBASIC1.95□□□□□ -2.1
Traf1P39428 Mir7683-201ENSMUST00000183842 61 ntBASIC1.95□□□□□ -2.1
Traf1P39428 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.95□□□□□ -2.1
Traf1P39428 Gm43578-201ENSMUST00000201250 459 ntBASIC1.95□□□□□ -2.1
Traf1P39428 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.95□□□□□ -2.1
Traf1P39428 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.95□□□□□ -2.1
Traf1P39428 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.95□□□□□ -2.1
Traf1P39428 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Traf1P39428 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.94□□□□□ -2.1
Traf1P39428 Mir1b-201ENSMUST00000117012 122 ntBASIC1.94□□□□□ -2.1
Traf1P39428 Gm11798-201ENSMUST00000119150 421 ntBASIC1.94□□□□□ -2.1
Traf1P39428 Gm15162-201ENSMUST00000119325 283 ntBASIC1.94□□□□□ -2.1
Traf1P39428 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Traf1P39428 Gm25730-201ENSMUST00000178753 165 ntBASIC1.94□□□□□ -2.1
Traf1P39428 Gm45456-201ENSMUST00000210841 243 ntBASIC1.94□□□□□ -2.1
Traf1P39428 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.94□□□□□ -2.1
Traf1P39428 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.94□□□□□ -2.1
Traf1P39428 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.94□□□□□ -2.1
Traf1P39428 Gm24043-201ENSMUST00000083108 116 ntBASIC1.94□□□□□ -2.1
Traf1P39428 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.94□□□□□ -2.1
Traf1P39428 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.94□□□□□ -2.1
Traf1P39428 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Traf1P39428 Gm23142-201ENSMUST00000101848 105 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm26240-201ENSMUST00000101893 105 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm25827-201ENSMUST00000157089 107 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm23718-201ENSMUST00000157350 307 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm26150-201ENSMUST00000157426 151 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Mir1936-201ENSMUST00000158699 93 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm25035-201ENSMUST00000175414 77 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm26200-201ENSMUST00000180273 79 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm44384-201ENSMUST00000200208 114 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm44960-201ENSMUST00000207403 141 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm5899-201ENSMUST00000071770 270 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Snord118-201ENSMUST00000082965 135 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm22365-201ENSMUST00000093750 117 ntBASIC1.93□□□□□ -2.1
Traf1P39428 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm15861-201ENSMUST00000120979 339 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm22386-201ENSMUST00000158192 129 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm24618-201ENSMUST00000177718 94 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm23953-201ENSMUST00000178214 94 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm26332-201ENSMUST00000179813 94 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm22863-201ENSMUST00000180265 94 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm27410-201ENSMUST00000183851 115 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm43238-201ENSMUST00000196463 359 ntBASIC1.92□□□□□ -2.1
Traf1P39428 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm26379-202ENSMUST00000200225 132 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm45907-201ENSMUST00000213023 193 ntBASIC1.92□□□□□ -2.1
Traf1P39428 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm24152-201ENSMUST00000082764 163 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Gm22685-201ENSMUST00000082848 106 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.92□□□□□ -2.1
Traf1P39428 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Traf1P39428 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Traf1P39428 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.91□□□□□ -2.1
Traf1P39428 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Traf1P39428 Gm11859-201ENSMUST00000118099 455 ntBASIC1.91□□□□□ -2.1
Traf1P39428 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Traf1P39428 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.91□□□□□ -2.1
Traf1P39428 Gm33866-201ENSMUST00000196911 289 ntBASIC1.91□□□□□ -2.1
Traf1P39428 Gm23100-201ENSMUST00000083455 141 ntBASIC1.91□□□□□ -2.1
Traf1P39428 Gm9059-201ENSMUST00000118319 183 ntBASIC1.9□□□□□ -2.11
Traf1P39428 Gm14574-201ENSMUST00000120644 279 ntBASIC1.9□□□□□ -2.11
Traf1P39428 Gm24632-201ENSMUST00000122770 323 ntBASIC1.9□□□□□ -2.11
Traf1P39428 Gm22447-201ENSMUST00000158155 92 ntBASIC1.9□□□□□ -2.11
Traf1P39428 Mir6419-201ENSMUST00000184784 113 ntBASIC1.9□□□□□ -2.11
Traf1P39428 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Traf1P39428 Gm24356-201ENSMUST00000082859 106 ntBASIC1.9□□□□□ -2.11
Traf1P39428 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.89□□□□□ -2.11
Traf1P39428 Gm6025-201ENSMUST00000121517 201 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Gm8121-201ENSMUST00000153583 499 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Gm25982-201ENSMUST00000157920 101 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Gm25491-201ENSMUST00000158733 308 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Mir3057-201ENSMUST00000175040 91 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Gm17067-202ENSMUST00000180131 123 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Gm28383-201ENSMUST00000187563 139 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Gm28912-201ENSMUST00000189001 234 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Gm29262-201ENSMUST00000190084 196 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms