Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm29657-201ENSMUST00000189807 342 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 Gm42960-201ENSMUST00000202160 241 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 Gm44811-201ENSMUST00000209120 228 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Cd40lgP27548 Gm22972-201ENSMUST00000083297 131 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 Gm25578-201ENSMUST00000083406 104 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.51□□□□□ -2.17
Cd40lgP27548 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Cd40lgP27548 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Cd40lgP27548 Gm25992-201ENSMUST00000102437 109 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 Gm6829-201ENSMUST00000119858 360 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 Gm24192-201ENSMUST00000157978 145 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 Gm24076-201ENSMUST00000158179 94 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Cd40lgP27548 Gm29603-201ENSMUST00000186792 334 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 Gm44960-201ENSMUST00000207403 141 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 Gm22299-201ENSMUST00000082663 136 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.5□□□□□ -2.17
Cd40lgP27548 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm12417-201ENSMUST00000119153 403 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm22082-201ENSMUST00000157587 161 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm28383-201ENSMUST00000187563 139 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm29167-201ENSMUST00000190024 377 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm29262-201ENSMUST00000190084 196 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm26265-202ENSMUST00000196326 133 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm18546-201ENSMUST00000197245 676 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm25813-201ENSMUST00000082748 191 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm25929-201ENSMUST00000082784 107 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm23377-201ENSMUST00000082943 126 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Mir340-201ENSMUST00000083483 98 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Mir148b-201ENSMUST00000083626 97 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.49□□□□□ -2.17
Cd40lgP27548 Gm22761-201ENSMUST00000102278 96 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Mir374b-201ENSMUST00000102314 95 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm13714-201ENSMUST00000117313 221 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm11859-201ENSMUST00000118099 455 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm22221-201ENSMUST00000157362 103 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm25434-201ENSMUST00000158278 167 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm20438-201ENSMUST00000174441 329 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm25035-201ENSMUST00000175414 77 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm24618-201ENSMUST00000177718 94 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm23953-201ENSMUST00000178214 94 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm26332-201ENSMUST00000179813 94 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm25253-201ENSMUST00000179958 107 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm22863-201ENSMUST00000180265 94 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.48□□□□□ -2.17
Cd40lgP27548 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm43976-201ENSMUST00000203637 235 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm44687-201ENSMUST00000204975 235 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.48□□□□□ -2.17
Cd40lgP27548 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm23404-201ENSMUST00000082543 97 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm24152-201ENSMUST00000082764 163 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Gm22364-201ENSMUST00000083097 98 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Mir429-201ENSMUST00000083493 83 ntBASIC1.48□□□□□ -2.17
Cd40lgP27548 Mir223-201ENSMUST00000102112 110 ntBASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm14980-201ENSMUST00000121247 736 ntBASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm22447-201ENSMUST00000158155 92 ntBASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm22768-201ENSMUST00000158366 153 ntBASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Mir3087-201ENSMUST00000199405 56 ntBASIC1.47□□□□□ -2.17
Cd40lgP27548 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.47□□□□□ -2.17
Cd40lgP27548 Gm22685-201ENSMUST00000082848 106 ntBASIC1.47□□□□□ -2.17
Cd40lgP27548 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm23142-201ENSMUST00000101848 105 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm26240-201ENSMUST00000101893 105 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm11862-201ENSMUST00000119678 659 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm24504-201ENSMUST00000157679 100 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Snord87-201ENSMUST00000175437 87 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm22510-201ENSMUST00000179304 79 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm23793-201ENSMUST00000179396 117 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm26336-201ENSMUST00000179449 79 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm26390-201ENSMUST00000179628 79 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm29229-201ENSMUST00000188874 323 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm36891-201ENSMUST00000191995 655 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.46□□□□□ -2.18
Cd40lgP27548 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.46□□□□□ -2.18
Cd40lgP27548 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.46□□□□□ -2.18
Cd40lgP27548 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms