Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm45317-201ENSMUST00000210385 223 ntBASIC3.68□□□□□ -1.82
Msx1P13297 Mir340-201ENSMUST00000083483 98 ntBASIC3.68□□□□□ -1.82
Msx1P13297 Mir9-2-201ENSMUST00000083490 72 ntBASIC3.68□□□□□ -1.82
Msx1P13297 Gm25630-201ENSMUST00000084000 162 ntBASIC3.68□□□□□ -1.82
Msx1P13297 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Msx1P13297 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Msx1P13297 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm23063-201ENSMUST00000102350 93 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm22115-201ENSMUST00000103976 133 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm23923-201ENSMUST00000104108 133 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm24468-201ENSMUST00000104489 104 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm16327-201ENSMUST00000137146 228 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm16533-201ENSMUST00000140035 228 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm23755-201ENSMUST00000157578 343 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm25978-201ENSMUST00000158698 90 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.67□□□□□ -1.82
Msx1P13297 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.67□□□□□ -1.82
Msx1P13297 Gm27189-201ENSMUST00000184119 190 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm36964-201ENSMUST00000191876 198 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.67□□□□□ -1.82
Msx1P13297 Gm44099-201ENSMUST00000203299 112 ntBASIC3.67□□□□□ -1.82
Msx1P13297 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.67□□□□□ -1.82
Msx1P13297 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Msx1P13297 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Msx1P13297 Gm13268-201ENSMUST00000117485 433 ntBASIC3.66□□□□□ -1.82
Msx1P13297 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Gm25825-201ENSMUST00000157091 124 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Gm23667-201ENSMUST00000157466 120 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Gm22515-201ENSMUST00000158273 305 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Gm23198-201ENSMUST00000158811 91 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Gm25535-201ENSMUST00000175364 125 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Msx1P13297 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Gm22739-201ENSMUST00000083437 160 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Mir370-201ENSMUST00000083499 79 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Msx1P13297 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.66□□□□□ -1.82
Msx1P13297 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Msx1P13297 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Msx1P13297 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Msx1P13297 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
Msx1P13297 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Msx1P13297 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.65□□□□□ -1.82
Msx1P13297 Gm25728-201ENSMUST00000104525 159 ntBASIC3.65□□□□□ -1.83
Msx1P13297 Gm14448-201ENSMUST00000116383 210 ntBASIC3.65□□□□□ -1.83
Msx1P13297 Gm23886-201ENSMUST00000122684 313 ntBASIC3.65□□□□□ -1.83
Msx1P13297 Gm23666-201ENSMUST00000158053 116 ntBASIC3.65□□□□□ -1.83
Msx1P13297 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC3.65□□□□□ -1.83
Msx1P13297 Gm26498-201ENSMUST00000177799 79 ntBASIC3.65□□□□□ -1.83
Msx1P13297 Gm26230-201ENSMUST00000180141 79 ntBASIC3.65□□□□□ -1.83
Msx1P13297 Mir7578-201ENSMUST00000183455 82 ntBASIC3.65□□□□□ -1.83
Msx1P13297 Gm26449-201ENSMUST00000082452 104 ntBASIC3.65□□□□□ -1.83
Msx1P13297 Gm25481-201ENSMUST00000083221 158 ntBASIC3.65□□□□□ -1.83
Msx1P13297 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Msx1P13297 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Msx1P13297 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Msx1P13297 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Msx1P13297 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Msx1P13297 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.64□□□□□ -1.83
Msx1P13297 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Msx1P13297 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Msx1P13297 Gm26273-201ENSMUST00000104180 131 ntBASIC3.64□□□□□ -1.83
Msx1P13297 Gm25105-201ENSMUST00000122477 130 ntBASIC3.64□□□□□ -1.83
Msx1P13297 Gm22451-201ENSMUST00000122803 151 ntBASIC3.64□□□□□ -1.83
Msx1P13297 Gm27828-201ENSMUST00000184108 119 ntBASIC3.64□□□□□ -1.83
Msx1P13297 Gm28270-201ENSMUST00000188550 109 ntBASIC3.64□□□□□ -1.83
Msx1P13297 Gm28328-201ENSMUST00000188869 109 ntBASIC3.64□□□□□ -1.83
Msx1P13297 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.64□□□□□ -1.83
Msx1P13297 Gm44459-201ENSMUST00000203926 160 ntBASIC3.64□□□□□ -1.83
Msx1P13297 Gm25130-201ENSMUST00000082650 156 ntBASIC3.64□□□□□ -1.83
Msx1P13297 Gm23518-201ENSMUST00000082835 153 ntBASIC3.64□□□□□ -1.83
Msx1P13297 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Msx1P13297 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Msx1P13297 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Msx1P13297 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Msx1P13297 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Msx1P13297 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Msx1P13297 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Msx1P13297 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Msx1P13297 Gm25765-201ENSMUST00000104100 132 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Gm11566-201ENSMUST00000118550 203 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Gm25933-201ENSMUST00000178943 108 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Gm27392-201ENSMUST00000185041 101 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Gm37343-201ENSMUST00000192542 111 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.63□□□□□ -1.83
Msx1P13297 Gm44824-201ENSMUST00000207021 229 ntBASIC3.63□□□□□ -1.83
Msx1P13297 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.63□□□□□ -1.83
Msx1P13297 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.63□□□□□ -1.83
Msx1P13297 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.63□□□□□ -1.83
Msx1P13297 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Gm25200-201ENSMUST00000083094 130 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Gm23247-201ENSMUST00000083373 107 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Gm24099-201ENSMUST00000083384 107 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Gm23040-201ENSMUST00000083869 163 ntBASIC3.63□□□□□ -1.83
Msx1P13297 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Msx1P13297 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Msx1P13297 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.63□□□□□ -1.83
Msx1P13297 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms