Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.49□□□□□ -1.85
RaraP11416 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.49□□□□□ -1.85
RaraP11416 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.49□□□□□ -1.85
RaraP11416 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
RaraP11416 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
RaraP11416 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RaraP11416 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RaraP11416 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RaraP11416 Gm14448-201ENSMUST00000116383 210 ntBASIC3.48□□□□□ -1.85
RaraP11416 Gm16186-201ENSMUST00000120132 216 ntBASIC3.48□□□□□ -1.85
RaraP11416 Gm23168-201ENSMUST00000157156 143 ntBASIC3.48□□□□□ -1.85
RaraP11416 Gm23434-201ENSMUST00000157179 100 ntBASIC3.48□□□□□ -1.85
RaraP11416 Gm23080-201ENSMUST00000157846 103 ntBASIC3.48□□□□□ -1.85
RaraP11416 Gm23644-201ENSMUST00000157856 77 ntBASIC3.48□□□□□ -1.85
RaraP11416 Mir28b-201ENSMUST00000175399 80 ntBASIC3.48□□□□□ -1.85
RaraP11416 Mir7081-201ENSMUST00000184490 75 ntBASIC3.48□□□□□ -1.85
RaraP11416 Gm27249-201ENSMUST00000185049 328 ntBASIC3.48□□□□□ -1.85
RaraP11416 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.48□□□□□ -1.85
RaraP11416 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.48□□□□□ -1.85
RaraP11416 Gm23303-201ENSMUST00000082714 152 ntBASIC3.48□□□□□ -1.85
RaraP11416 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.48□□□□□ -1.85
RaraP11416 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RaraP11416 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.48□□□□□ -1.85
RaraP11416 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
RaraP11416 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
RaraP11416 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RaraP11416 Mir693-201ENSMUST00000102187 89 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm24232-201ENSMUST00000104314 132 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm23772-201ENSMUST00000104433 102 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm24480-201ENSMUST00000157442 103 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm23895-201ENSMUST00000158108 160 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm22612-201ENSMUST00000158293 101 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm25519-201ENSMUST00000158392 127 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm23194-201ENSMUST00000158813 105 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm22108-201ENSMUST00000177961 106 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm24798-201ENSMUST00000179334 106 ntBASIC3.47□□□□□ -1.85
RaraP11416 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RaraP11416 Gm37116-201ENSMUST00000195161 147 ntBASIC3.47□□□□□ -1.85
RaraP11416 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm4945-201ENSMUST00000075152 453 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm10025-201ENSMUST00000079568 372 ntBASIC3.47□□□□□ -1.85
RaraP11416 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RaraP11416 Gm22304-201ENSMUST00000082688 129 ntBASIC3.47□□□□□ -1.85
RaraP11416 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RaraP11416 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RaraP11416 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.47□□□□□ -1.85
RaraP11416 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RaraP11416 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RaraP11416 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
RaraP11416 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.46□□□□□ -1.85
RaraP11416 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RaraP11416 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RaraP11416 Gm25764-201ENSMUST00000104092 134 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm24890-201ENSMUST00000104389 102 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm25727-201ENSMUST00000104522 131 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm27921-201ENSMUST00000183968 108 ntBASIC3.46□□□□□ -1.86
RaraP11416 Mir8090-201ENSMUST00000185078 136 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm28155-201ENSMUST00000191066 151 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm37290-201ENSMUST00000195775 339 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm43899-201ENSMUST00000203675 246 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm45245-201ENSMUST00000210082 376 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm6030-201ENSMUST00000078768 402 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm22509-201ENSMUST00000082775 107 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm23247-201ENSMUST00000083373 107 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RaraP11416 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
RaraP11416 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RaraP11416 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.46□□□□□ -1.86
RaraP11416 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.45□□□□□ -1.86
RaraP11416 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RaraP11416 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
RaraP11416 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
RaraP11416 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
RaraP11416 Gm14973-201ENSMUST00000117248 255 ntBASIC3.45□□□□□ -1.86
RaraP11416 Gm23718-201ENSMUST00000157350 307 ntBASIC3.45□□□□□ -1.86
RaraP11416 Mir1291-201ENSMUST00000199842 117 ntBASIC3.45□□□□□ -1.86
RaraP11416 Gm45080-201ENSMUST00000206648 283 ntBASIC3.45□□□□□ -1.86
RaraP11416 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.45□□□□□ -1.86
RaraP11416 Gm21007-201ENSMUST00000221024 326 ntBASIC3.45□□□□□ -1.86
RaraP11416 Gm25797-201ENSMUST00000082640 107 ntBASIC3.45□□□□□ -1.86
RaraP11416 Gm26265-201ENSMUST00000083277 135 ntBASIC3.45□□□□□ -1.86
RaraP11416 Snora34-201ENSMUST00000083402 138 ntBASIC3.45□□□□□ -1.86
RaraP11416 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.45□□□□□ -1.86
RaraP11416 Gm22576-201ENSMUST00000083733 104 ntBASIC3.45□□□□□ -1.86
RaraP11416 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RaraP11416 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RaraP11416 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RaraP11416 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RaraP11416 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RaraP11416 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RaraP11416 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.44□□□□□ -1.86
RaraP11416 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.44□□□□□ -1.86
RaraP11416 Gm15067-201ENSMUST00000119534 156 ntBASIC3.44□□□□□ -1.86
RaraP11416 Gm24595-201ENSMUST00000122501 110 ntBASIC3.44□□□□□ -1.86
RaraP11416 Gm16533-201ENSMUST00000140035 228 ntBASIC3.44□□□□□ -1.86
RaraP11416 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RaraP11416 Gm25060-201ENSMUST00000157374 130 ntBASIC3.44□□□□□ -1.86
RaraP11416 Gm29604-201ENSMUST00000187176 163 ntBASIC3.44□□□□□ -1.86
RaraP11416 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.44□□□□□ -1.86
RaraP11416 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms