Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Lire1P11260 Gm24625-201ENSMUST00000082622 130 ntBASIC1.53□□□□□ -2.16
Lire1P11260 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Lire1P11260 Gm26396-201ENSMUST00000104093 132 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Lire1P11260 Gm11512-201ENSMUST00000119669 663 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Gm13729-201ENSMUST00000120328 406 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Gm14269-201ENSMUST00000120455 306 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Lire1P11260 Gm22164-201ENSMUST00000158413 106 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Gm22665-201ENSMUST00000158720 275 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.52□□□□□ -2.17
Lire1P11260 Gm24510-201ENSMUST00000174965 94 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.52□□□□□ -2.17
Lire1P11260 Gm35736-201ENSMUST00000203681 313 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Gm45116-201ENSMUST00000207392 275 ntBASIC1.52□□□□□ -2.17
Lire1P11260 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Gm23515-201ENSMUST00000082829 107 ntBASIC1.52□□□□□ -2.17
Lire1P11260 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.51□□□□□ -2.17
Lire1P11260 Gm9059-201ENSMUST00000118319 183 ntBASIC1.51□□□□□ -2.17
Lire1P11260 Gm13396-201ENSMUST00000120617 271 ntBASIC1.51□□□□□ -2.17
Lire1P11260 Gm23339-201ENSMUST00000158962 139 ntBASIC1.51□□□□□ -2.17
Lire1P11260 Gm23267-201ENSMUST00000178490 132 ntBASIC1.51□□□□□ -2.17
Lire1P11260 Gm16399-201ENSMUST00000181423 219 ntBASIC1.51□□□□□ -2.17
Lire1P11260 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.51□□□□□ -2.17
Lire1P11260 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.51□□□□□ -2.17
Lire1P11260 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.51□□□□□ -2.17
Lire1P11260 Gm37089-201ENSMUST00000195616 129 ntBASIC1.51□□□□□ -2.17
Lire1P11260 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.51□□□□□ -2.17
Lire1P11260 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Lire1P11260 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.51□□□□□ -2.17
Lire1P11260 Gm25414-201ENSMUST00000101814 107 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Mir544-201ENSMUST00000103813 78 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Mir872-201ENSMUST00000104728 81 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.5□□□□□ -2.17
Lire1P11260 Gm24005-201ENSMUST00000158459 296 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Mir1936-201ENSMUST00000158699 93 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
Lire1P11260 Gm24085-201ENSMUST00000175172 116 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Gm28343-201ENSMUST00000185386 112 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Gm29013-201ENSMUST00000187431 237 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.5□□□□□ -2.17
Lire1P11260 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Gm9251-201ENSMUST00000197202 628 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.5□□□□□ -2.17
Lire1P11260 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.5□□□□□ -2.17
Lire1P11260 Gm26080-201ENSMUST00000104069 131 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Snord98-201ENSMUST00000116819 65 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Gm27926-201ENSMUST00000157180 66 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Gm25559-201ENSMUST00000157182 74 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Gm23535-201ENSMUST00000157542 106 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Gm22963-201ENSMUST00000157960 91 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Gm23714-201ENSMUST00000179259 105 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Gm27313-201ENSMUST00000183500 142 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Gm37693-201ENSMUST00000194562 234 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Lire1P11260 Gm43993-201ENSMUST00000203972 247 ntBASIC1.49□□□□□ -2.17
Lire1P11260 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.49□□□□□ -2.17
Lire1P11260 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Lire1P11260 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Lire1P11260 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.48□□□□□ -2.17
Lire1P11260 Gm24438-201ENSMUST00000157893 115 ntBASIC1.48□□□□□ -2.17
Lire1P11260 Gm28597-201ENSMUST00000187664 666 ntBASIC1.48□□□□□ -2.17
Lire1P11260 Gm43911-201ENSMUST00000203097 76 ntBASIC1.48□□□□□ -2.17
Lire1P11260 Gm24406-201ENSMUST00000083026 128 ntBASIC1.48□□□□□ -2.17
Lire1P11260 Gm25207-201ENSMUST00000093745 107 ntBASIC1.48□□□□□ -2.17
Lire1P11260 Gm14803-201ENSMUST00000117163 361 ntBASIC1.47□□□□□ -2.17
Lire1P11260 Gm12449-201ENSMUST00000117572 234 ntBASIC1.47□□□□□ -2.17
Lire1P11260 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.47□□□□□ -2.17
Lire1P11260 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.47□□□□□ -2.17
Lire1P11260 Gm45878-201ENSMUST00000211839 241 ntBASIC1.47□□□□□ -2.17
Lire1P11260 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.47□□□□□ -2.17
Lire1P11260 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.47□□□□□ -2.17
Lire1P11260 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Lire1P11260 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm26074-201ENSMUST00000104063 129 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm24902-201ENSMUST00000158126 123 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm3027-201ENSMUST00000167579 451 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm23967-201ENSMUST00000175062 78 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm26430-201ENSMUST00000178054 107 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm23379-201ENSMUST00000180026 107 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm27326-201ENSMUST00000183504 95 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Lire1P11260 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Lire1P11260 Snord1a-201ENSMUST00000083160 74 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Gm23731-201ENSMUST00000083749 107 ntBASIC1.46□□□□□ -2.18
Lire1P11260 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Lire1P11260 Gm22785-201ENSMUST00000104087 132 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Gm11254-201ENSMUST00000122368 653 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Gm24379-201ENSMUST00000122695 86 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Gm27755-201ENSMUST00000184623 132 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Gm28383-201ENSMUST00000187563 139 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Gm29262-201ENSMUST00000190084 196 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Gm36953-201ENSMUST00000195295 268 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Gm5010-201ENSMUST00000213131 260 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms