Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm25817-201ENSMUST00000177758 121 ntBASIC3.03□□□□□ -1.92
Hoxd3P09027 Gm26498-201ENSMUST00000177799 79 ntBASIC3.03□□□□□ -1.92
Hoxd3P09027 Gm24766-201ENSMUST00000179182 121 ntBASIC3.03□□□□□ -1.92
Hoxd3P09027 Gm26230-201ENSMUST00000180141 79 ntBASIC3.03□□□□□ -1.92
Hoxd3P09027 Gm29408-201ENSMUST00000187536 216 ntBASIC3.03□□□□□ -1.92
Hoxd3P09027 Gm23518-201ENSMUST00000082835 153 ntBASIC3.03□□□□□ -1.92
Hoxd3P09027 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Hoxd3P09027 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.03□□□□□ -1.92
Hoxd3P09027 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm26418-201ENSMUST00000104275 137 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm24067-201ENSMUST00000104514 85 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm14923-201ENSMUST00000118270 155 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm24559-201ENSMUST00000157519 121 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm25436-201ENSMUST00000158275 145 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm23198-201ENSMUST00000158811 91 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm25633-201ENSMUST00000178565 107 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm27760-201ENSMUST00000185048 114 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm44099-201ENSMUST00000203299 112 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm5358-201ENSMUST00000212814 353 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm22805-201ENSMUST00000082739 107 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Gm22868-201ENSMUST00000083955 164 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.02□□□□□ -1.93
Hoxd3P09027 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
Hoxd3P09027 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Hoxd3P09027 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
Hoxd3P09027 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Hoxd3P09027 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm25765-201ENSMUST00000104100 132 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm25728-201ENSMUST00000104525 159 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm15069-201ENSMUST00000117792 192 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm15068-201ENSMUST00000119796 192 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm26276-201ENSMUST00000157099 109 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm27828-201ENSMUST00000184108 119 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm44666-201ENSMUST00000208544 391 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 AC126939.1-201ENSMUST00000224943 226 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm22306-201ENSMUST00000082692 107 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm26126-201ENSMUST00000083188 164 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Mir489-201ENSMUST00000093599 107 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Hoxd3P09027 Gm37331-201ENSMUST00000192367 3375 ntBASIC3.01□□□□□ -1.93
Hoxd3P09027 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Hoxd3P09027 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
Hoxd3P09027 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3□□□□□ -1.93
Hoxd3P09027 n-R5s158-201ENSMUST00000104095 118 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm9119-201ENSMUST00000118866 495 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm13246-201ENSMUST00000120994 315 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm14709-201ENSMUST00000121225 304 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm22451-201ENSMUST00000122803 151 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm23957-201ENSMUST00000157209 90 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm22796-201ENSMUST00000157234 106 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm25978-201ENSMUST00000158698 90 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm37290-201ENSMUST00000195775 339 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm22245-201ENSMUST00000082479 103 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Mir155-201ENSMUST00000083463 65 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Hoxd3P09027 Gm37143-201ENSMUST00000195180 3259 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm15302-201ENSMUST00000117779 2630 ntBASIC3□□□□□ -1.93
Hoxd3P09027 Gm42447-201ENSMUST00000200102 2903 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Hoxd3P09027 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Hoxd3P09027 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Hoxd3P09027 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Hoxd3P09027 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
Hoxd3P09027 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Hoxd3P09027 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Hoxd3P09027 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm26076-201ENSMUST00000104065 105 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm26273-201ENSMUST00000104180 131 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm14674-201ENSMUST00000117816 342 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm23788-201ENSMUST00000122535 106 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm24998-201ENSMUST00000157908 89 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm24573-201ENSMUST00000175499 112 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm6625-201ENSMUST00000177870 272 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Mir713-201ENSMUST00000178651 108 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm24390-201ENSMUST00000179578 62 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Mir7676-1-201ENSMUST00000183491 62 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Mir7676-2-201ENSMUST00000183523 62 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm27773-201ENSMUST00000184087 78 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm28155-201ENSMUST00000191066 151 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm37239-201ENSMUST00000193510 141 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 n-TSaga9-201ENSMUST00000197675 107 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms