Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.25□□□□□ -2.21
TnfP06804 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.25□□□□□ -2.21
TnfP06804 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
TnfP06804 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.24□□□□□ -2.21
TnfP06804 Gm8121-201ENSMUST00000153583 499 ntBASIC1.24□□□□□ -2.21
TnfP06804 Gm23390-201ENSMUST00000157393 106 ntBASIC1.24□□□□□ -2.21
TnfP06804 Gm23535-201ENSMUST00000157542 106 ntBASIC1.24□□□□□ -2.21
TnfP06804 Gm24551-201ENSMUST00000158645 92 ntBASIC1.24□□□□□ -2.21
TnfP06804 Gm23208-201ENSMUST00000158666 127 ntBASIC1.24□□□□□ -2.21
TnfP06804 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TnfP06804 Gm44308-201ENSMUST00000197080 99 ntBASIC1.24□□□□□ -2.21
TnfP06804 Gm45116-201ENSMUST00000207392 275 ntBASIC1.24□□□□□ -2.21
TnfP06804 Gm45456-201ENSMUST00000210841 243 ntBASIC1.24□□□□□ -2.21
TnfP06804 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.24□□□□□ -2.21
TnfP06804 Gm10092-201ENSMUST00000077110 180 ntBASIC1.24□□□□□ -2.21
TnfP06804 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.24□□□□□ -2.21
TnfP06804 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TnfP06804 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
TnfP06804 Gm25495-201ENSMUST00000104431 131 ntBASIC1.23□□□□□ -2.21
TnfP06804 Gm17148-201ENSMUST00000164702 249 ntBASIC1.23□□□□□ -2.21
TnfP06804 Gm26430-201ENSMUST00000178054 107 ntBASIC1.23□□□□□ -2.21
TnfP06804 Gm26435-201ENSMUST00000179026 107 ntBASIC1.23□□□□□ -2.21
TnfP06804 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TnfP06804 Gm26265-202ENSMUST00000196326 133 ntBASIC1.23□□□□□ -2.21
TnfP06804 Gm44491-201ENSMUST00000196794 96 ntBASIC1.23□□□□□ -2.21
TnfP06804 Gm45207-201ENSMUST00000207469 145 ntBASIC1.23□□□□□ -2.21
TnfP06804 Gm45403-201ENSMUST00000209453 276 ntBASIC1.23□□□□□ -2.21
TnfP06804 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.23□□□□□ -2.21
TnfP06804 Gm5899-201ENSMUST00000071770 270 ntBASIC1.23□□□□□ -2.21
TnfP06804 Gm24035-201ENSMUST00000082867 107 ntBASIC1.23□□□□□ -2.21
TnfP06804 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.23□□□□□ -2.21
TnfP06804 Gm25759-201ENSMUST00000103988 129 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm23907-201ENSMUST00000104595 189 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm11857-201ENSMUST00000119817 324 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm14269-201ENSMUST00000120455 306 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm14287-201ENSMUST00000121060 117 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm23328-201ENSMUST00000157418 132 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm22485-201ENSMUST00000157990 109 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm25486-201ENSMUST00000158726 63 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm25491-201ENSMUST00000158733 308 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm24668-201ENSMUST00000158935 104 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm24085-201ENSMUST00000175172 116 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm25253-201ENSMUST00000179958 107 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm27313-201ENSMUST00000183500 142 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm27711-201ENSMUST00000183802 118 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.22□□□□□ -2.21
TnfP06804 Gm42834-201ENSMUST00000196845 256 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm38395-201ENSMUST00000199904 830 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm43406-201ENSMUST00000200356 334 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm43993-201ENSMUST00000203972 247 ntBASIC1.22□□□□□ -2.21
TnfP06804 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC1.22□□□□□ -2.21
TnfP06804 Gm23731-201ENSMUST00000083749 107 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.22□□□□□ -2.21
TnfP06804 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.22□□□□□ -2.21
TnfP06804 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
TnfP06804 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.21□□□□□ -2.22
TnfP06804 Gm11512-201ENSMUST00000119669 663 ntBASIC1.21□□□□□ -2.22
TnfP06804 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.21□□□□□ -2.22
TnfP06804 Gm25768-201ENSMUST00000158570 98 ntBASIC1.21□□□□□ -2.22
TnfP06804 Gm24366-201ENSMUST00000175383 86 ntBASIC1.21□□□□□ -2.22
TnfP06804 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TnfP06804 Snord68-201ENSMUST00000082516 86 ntBASIC1.21□□□□□ -2.22
TnfP06804 Gm22980-201ENSMUST00000082608 70 ntBASIC1.21□□□□□ -2.22
TnfP06804 Gm24624-201ENSMUST00000082617 164 ntBASIC1.21□□□□□ -2.22
TnfP06804 Gm25357-201ENSMUST00000082745 72 ntBASIC1.21□□□□□ -2.22
TnfP06804 Gm23097-201ENSMUST00000083448 105 ntBASIC1.21□□□□□ -2.22
TnfP06804 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.21□□□□□ -2.22
TnfP06804 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.21□□□□□ -2.22
TnfP06804 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
TnfP06804 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.2□□□□□ -2.22
TnfP06804 Snord98-201ENSMUST00000116819 65 ntBASIC1.2□□□□□ -2.22
TnfP06804 Gm9059-201ENSMUST00000118319 183 ntBASIC1.2□□□□□ -2.22
TnfP06804 Gm15529-201ENSMUST00000121833 994 ntBASIC1.2□□□□□ -2.22
TnfP06804 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.2□□□□□ -2.22
TnfP06804 Gm22136-201ENSMUST00000158751 268 ntBASIC1.2□□□□□ -2.22
TnfP06804 Traj60-201ENSMUST00000167781 54 ntBASIC1.2□□□□□ -2.22
TnfP06804 Gm26652-202ENSMUST00000181672 475 ntBASIC1.2□□□□□ -2.22
TnfP06804 Mir7052-201ENSMUST00000184821 65 ntBASIC1.2□□□□□ -2.22
TnfP06804 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
TnfP06804 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TnfP06804 Gm21937-201ENSMUST00000222825 218 ntBASIC1.2□□□□□ -2.22
TnfP06804 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
TnfP06804 Gm14803-201ENSMUST00000117163 361 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm13475-201ENSMUST00000119290 234 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm11862-201ENSMUST00000119678 659 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm14392-201ENSMUST00000120332 401 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm14413-201ENSMUST00000122158 408 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TnfP06804 Gm27926-201ENSMUST00000157180 66 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm23016-201ENSMUST00000158431 62 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm24005-201ENSMUST00000158459 296 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm27421-201ENSMUST00000184729 167 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm29613-201ENSMUST00000185846 313 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm29544-201ENSMUST00000188860 313 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm28808-201ENSMUST00000190978 313 ntBASIC1.19□□□□□ -2.22
TnfP06804 Gm24150-201ENSMUST00000082759 104 ntBASIC1.19□□□□□ -2.22
TnfP06804 Mir196b-201ENSMUST00000083509 85 ntBASIC1.19□□□□□ -2.22
TnfP06804 Mir872-201ENSMUST00000104728 81 ntBASIC1.18□□□□□ -2.22
TnfP06804 Gm12432-201ENSMUST00000119540 186 ntBASIC1.18□□□□□ -2.22
TnfP06804 Mir1936-201ENSMUST00000158699 93 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms