| Hoxa3 | P02831 | Olfr65-203 | ENSMUST00000214300 | 2855 nt | APPRIS ALT1 TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr58-202 | ENSMUST00000215112 | 2454 nt | APPRIS P1 TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Mir499-201 | ENSMUST00000102357 | 79 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Mir466p-201 | ENSMUST00000103925 | 89 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm11471-201 | ENSMUST00000121824 | 198 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm16355-201 | ENSMUST00000128606 | 231 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm25424-201 | ENSMUST00000157612 | 58 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm23381-201 | ENSMUST00000157676 | 94 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm22767-201 | ENSMUST00000158365 | 165 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm17113-201 | ENSMUST00000170118 | 171 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm24573-201 | ENSMUST00000175499 | 112 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm25935-201 | ENSMUST00000178746 | 107 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm27585-201 | ENSMUST00000183717 | 199 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm29597-201 | ENSMUST00000188035 | 308 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | AC159885.1-201 | ENSMUST00000222221 | 199 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | AC154636.2-201 | ENSMUST00000222538 | 161 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | AC122320.1-201 | ENSMUST00000227233 | 105 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | AC123860.1-201 | ENSMUST00000228033 | 481 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Zfp985-201 | ENSMUST00000081742 | 2762 nt | APPRIS P1 TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Vmn1r75-206 | ENSMUST00000228463 | 6508 nt | APPRIS P2 BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr786-202 | ENSMUST00000204529 | 2824 nt | APPRIS P1 TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr800-202 | ENSMUST00000217094 | 3831 nt | APPRIS P1 TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr1256-204 | ENSMUST00000215613 | 4543 nt | APPRIS P1 TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr630-201 | ENSMUST00000106880 | 2198 nt | APPRIS P1 TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr1370-204 | ENSMUST00000215806 | 4322 nt | APPRIS P1 TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Uty-201 | ENSMUST00000069309 | 5208 nt | APPRIS P3 TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Defb43-201 | ENSMUST00000100491 | 408 nt | APPRIS P1 TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm25466-201 | ENSMUST00000103995 | 132 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm16032-201 | ENSMUST00000118534 | 168 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm13862-201 | ENSMUST00000121220 | 197 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm25280-201 | ENSMUST00000157269 | 101 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm23325-201 | ENSMUST00000157422 | 129 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm24958-201 | ENSMUST00000158009 | 97 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm26214-201 | ENSMUST00000158581 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Mir3965-201 | ENSMUST00000175570 | 69 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm21738-201 | ENSMUST00000177817 | 681 nt | APPRIS P1 TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm36551-201 | ENSMUST00000196787 | 300 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm44322-201 | ENSMUST00000196830 | 115 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm44526-201 | ENSMUST00000204664 | 121 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm18991-201 | ENSMUST00000209225 | 746 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | AC171206.2-201 | ENSMUST00000215252 | 389 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm24474-201 | ENSMUST00000220504 | 469 nt | TSL 2 BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm11351-202 | ENSMUST00000225724 | 478 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm22248-201 | ENSMUST00000082482 | 150 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Snora19-201 | ENSMUST00000082962 | 132 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm23658-201 | ENSMUST00000083233 | 132 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm23246-201 | ENSMUST00000083371 | 67 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr124-204 | ENSMUST00000217365 | 4365 nt | APPRIS P1 TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Vmn1r185-211 | ENSMUST00000228467 | 6915 nt | APPRIS P1 BASIC | 2.38 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm43046-201 | ENSMUST00000198771 | 2451 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm5141-202 | ENSMUST00000201047 | 3279 nt | APPRIS P1 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Vmn1r82-203 | ENSMUST00000227672 | 3651 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr789-202 | ENSMUST00000213992 | 4421 nt | APPRIS P1 TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm43879-201 | ENSMUST00000203811 | 3760 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm15303-201 | ENSMUST00000118676 | 2624 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm24132-201 | ENSMUST00000104745 | 91 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | n-R5s189-201 | ENSMUST00000122675 | 114 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm12801-201 | ENSMUST00000153228 | 263 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Mir28b-201 | ENSMUST00000175399 | 80 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Rpl31-ps15-201 | ENSMUST00000181857 | 375 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Mir8103-201 | ENSMUST00000183945 | 107 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Mir6405-201 | ENSMUST00000184584 | 124 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm29406-201 | ENSMUST00000186400 | 235 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm29553-201 | ENSMUST00000189692 | 279 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm37624-201 | ENSMUST00000193751 | 219 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm6796-201 | ENSMUST00000211919 | 243 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | CT010449.1-201 | ENSMUST00000220624 | 153 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | CT030687.1-201 | ENSMUST00000221854 | 162 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm26204-201 | ENSMUST00000082906 | 107 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm26493-201 | ENSMUST00000083155 | 136 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | 2410141K09Rik-201 | ENSMUST00000091541 | 288 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Tlr3-202 | ENSMUST00000167106 | 4093 nt | APPRIS P1 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm8935-202 | ENSMUST00000105727 | 1959 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm12512-201 | ENSMUST00000119620 | 217 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm26105-201 | ENSMUST00000157253 | 190 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | H3f3aos-202 | ENSMUST00000159740 | 229 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm6788-201 | ENSMUST00000166459 | 270 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm17161-201 | ENSMUST00000169187 | 524 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm21060-201 | ENSMUST00000179346 | 168 nt | APPRIS P1 BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm27532-201 | ENSMUST00000183726 | 113 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm27505-201 | ENSMUST00000185071 | 110 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Ranbp2-ps5-201 | ENSMUST00000185141 | 379 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm43521-201 | ENSMUST00000197838 | 255 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm43107-201 | ENSMUST00000198729 | 255 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm9967-203 | ENSMUST00000206903 | 408 nt | TSL 3 BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm18617-201 | ENSMUST00000222311 | 259 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm31025-201 | ENSMUST00000222553 | 482 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Mir384-201 | ENSMUST00000083565 | 88 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr498-201 | ENSMUST00000217616 | 2260 nt | APPRIS P1 BASIC | 2.36 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | AC157570.1-201 | ENSMUST00000218052 | 3778 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | N4bp2l2-201 | ENSMUST00000118316 | 8982 nt | APPRIS P1 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Vmn2r72-201 | ENSMUST00000063425 | 2571 nt | APPRIS P1 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Olfr821-203 | ENSMUST00000214177 | 1929 nt | APPRIS P1 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm24122-201 | ENSMUST00000104107 | 132 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm25526-201 | ENSMUST00000104332 | 132 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm26099-201 | ENSMUST00000157248 | 109 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm24691-201 | ENSMUST00000157762 | 140 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm24736-201 | ENSMUST00000158862 | 130 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Gm27465-201 | ENSMUST00000184290 | 91 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| Hoxa3 | P02831 | Trav6d-3-202 | ENSMUST00000184883 | 308 nt | APPRIS P1 BASIC | 2.35 | □□□□□ -2.03 | | |