Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Mir5104-201ENSMUST00000175319 94 ntBASIC0.76□□□□□ -2.29
CopeO89079 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.76□□□□□ -2.29
CopeO89079 Mir7665-201ENSMUST00000184907 63 ntBASIC0.76□□□□□ -2.29
CopeO89079 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.76□□□□□ -2.29
CopeO89079 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CopeO89079 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.76□□□□□ -2.29
CopeO89079 Gm24623-201ENSMUST00000082616 194 ntBASIC0.76□□□□□ -2.29
CopeO89079 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.76□□□□□ -2.29
CopeO89079 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.75□□□□□ -2.29
CopeO89079 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.75□□□□□ -2.29
CopeO89079 Gm13475-201ENSMUST00000119290 234 ntBASIC0.75□□□□□ -2.29
CopeO89079 Gm24768-201ENSMUST00000158512 94 ntBASIC0.75□□□□□ -2.29
CopeO89079 Gm28926-201ENSMUST00000191063 680 ntBASIC0.75□□□□□ -2.29
CopeO89079 Gm37641-201ENSMUST00000193837 239 ntBASIC0.75□□□□□ -2.29
CopeO89079 Gm37399-201ENSMUST00000195224 416 ntBASIC0.75□□□□□ -2.29
CopeO89079 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.75□□□□□ -2.29
CopeO89079 Gm43602-201ENSMUST00000196772 300 ntBASIC0.75□□□□□ -2.29
CopeO89079 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.75□□□□□ -2.29
CopeO89079 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.75□□□□□ -2.29
CopeO89079 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm25543-201ENSMUST00000122678 312 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm25253-201ENSMUST00000179958 107 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm27271-201ENSMUST00000183509 170 ntBASIC0.74□□□□□ -2.29
CopeO89079 Mir195b-201ENSMUST00000184814 97 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm28917-201ENSMUST00000187294 237 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm28766-201ENSMUST00000191086 234 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm38113-201ENSMUST00000193704 201 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm26265-202ENSMUST00000196326 133 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.74□□□□□ -2.29
CopeO89079 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm46997-201ENSMUST00000222108 217 ntBASIC0.74□□□□□ -2.29
CopeO89079 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.74□□□□□ -2.29
CopeO89079 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.74□□□□□ -2.29
CopeO89079 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm25851-201ENSMUST00000082794 107 ntBASIC0.74□□□□□ -2.29
CopeO89079 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.74□□□□□ -2.29
CopeO89079 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.73□□□□□ -2.29
CopeO89079 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
CopeO89079 Gm13967-201ENSMUST00000120404 380 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm11792-201ENSMUST00000120640 168 ntBASIC0.73□□□□□ -2.29
CopeO89079 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm20386-201ENSMUST00000174010 132 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm22403-201ENSMUST00000174919 84 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm22308-201ENSMUST00000177609 107 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm8151-201ENSMUST00000184817 871 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.73□□□□□ -2.29
CopeO89079 Gm29352-201ENSMUST00000188054 544 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm44923-201ENSMUST00000206673 85 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm9795-201ENSMUST00000062156 693 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm23093-201ENSMUST00000083450 102 ntBASIC0.73□□□□□ -2.29
CopeO89079 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CopeO89079 Gm26377-201ENSMUST00000102184 108 ntBASIC0.72□□□□□ -2.29
CopeO89079 Gm26339-201ENSMUST00000102368 99 ntBASIC0.72□□□□□ -2.29
CopeO89079 Gm26149-201ENSMUST00000157432 108 ntBASIC0.72□□□□□ -2.29
CopeO89079 Gm24154-201ENSMUST00000175261 130 ntBASIC0.72□□□□□ -2.29
CopeO89079 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.72□□□□□ -2.29
CopeO89079 Gm27420-201ENSMUST00000183823 79 ntBASIC0.72□□□□□ -2.29
CopeO89079 Gm37438-201ENSMUST00000192813 393 ntBASIC0.72□□□□□ -2.29
CopeO89079 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.72□□□□□ -2.29
CopeO89079 Gm32300-201ENSMUST00000221735 515 ntBASIC0.72□□□□□ -2.29
CopeO89079 Gm25636-201ENSMUST00000082666 133 ntBASIC0.72□□□□□ -2.29
CopeO89079 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.72□□□□□ -2.29
CopeO89079 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.71□□□□□ -2.29
CopeO89079 Gm24579-201ENSMUST00000103964 144 ntBASIC0.71□□□□□ -2.3
CopeO89079 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
CopeO89079 Gm26278-201ENSMUST00000157098 132 ntBASIC0.71□□□□□ -2.3
CopeO89079 Gm25011-201ENSMUST00000158398 126 ntBASIC0.71□□□□□ -2.3
CopeO89079 Mir1936-201ENSMUST00000158699 93 ntBASIC0.71□□□□□ -2.3
CopeO89079 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.71□□□□□ -2.3
CopeO89079 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.71□□□□□ -2.3
CopeO89079 Gm23145-201ENSMUST00000178912 79 ntBASIC0.71□□□□□ -2.3
CopeO89079 Gm26652-202ENSMUST00000181672 475 ntBASIC0.71□□□□□ -2.3
CopeO89079 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.71□□□□□ -2.3
CopeO89079 Gm42855-201ENSMUST00000197388 253 ntBASIC0.71□□□□□ -2.3
CopeO89079 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.71□□□□□ -2.3
CopeO89079 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CopeO89079 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.71□□□□□ -2.3
CopeO89079 Gm23766-201ENSMUST00000103894 80 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm11862-201ENSMUST00000119678 659 ntBASIC0.7□□□□□ -2.3
CopeO89079 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm23329-201ENSMUST00000157415 108 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm24191-201ENSMUST00000157977 122 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm23352-201ENSMUST00000158428 64 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm23025-201ENSMUST00000158769 111 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.7□□□□□ -2.3
CopeO89079 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.7□□□□□ -2.3
CopeO89079 Gm26501-201ENSMUST00000178307 107 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.7□□□□□ -2.3
CopeO89079 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.7□□□□□ -2.3
CopeO89079 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.7□□□□□ -2.3
CopeO89079 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.7□□□□□ -2.3
CopeO89079 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.7□□□□□ -2.3
CopeO89079 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.7□□□□□ -2.3
CopeO89079 Gm28257-201ENSMUST00000185244 463 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm38395-201ENSMUST00000199904 830 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.7□□□□□ -2.3
CopeO89079 Gm8125-201ENSMUST00000216602 738 ntBASIC0.7□□□□□ -2.3
CopeO89079 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.69□□□□□ -2.3
CopeO89079 Gm23836-201ENSMUST00000104434 129 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms