Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.54□□□□□ -2
Lmx1bO88609 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.54□□□□□ -2
Lmx1bO88609 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Lmx1bO88609 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.54□□□□□ -2
Lmx1bO88609 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Lmx1bO88609 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.53□□□□□ -2
Lmx1bO88609 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Lmx1bO88609 Gm25500-201ENSMUST00000104426 123 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm14448-201ENSMUST00000116383 210 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm14069-201ENSMUST00000120815 229 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.53□□□□□ -2
Lmx1bO88609 Gm23642-201ENSMUST00000157858 258 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm24879-201ENSMUST00000158386 143 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm22527-201ENSMUST00000158816 106 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Lmx1bO88609 Mir8103-201ENSMUST00000183945 107 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm27470-201ENSMUST00000184070 210 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm43521-201ENSMUST00000197838 255 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.53□□□□□ -2
Lmx1bO88609 Gm43107-201ENSMUST00000198729 255 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm43993-201ENSMUST00000203972 247 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm44526-201ENSMUST00000204664 121 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm44859-201ENSMUST00000207831 94 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Gm18991-201ENSMUST00000209225 746 ntBASIC2.53□□□□□ -2
Lmx1bO88609 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.53□□□□□ -2
Lmx1bO88609 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.53□□□□□ -2
Lmx1bO88609 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.53□□□□□ -2
Lmx1bO88609 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Lmx1bO88609 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Lmx1bO88609 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Lmx1bO88609 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Lmx1bO88609 Gm16171-201ENSMUST00000118004 324 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 Gm11786-201ENSMUST00000120799 155 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 Gm25985-201ENSMUST00000122677 107 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.52□□□□□ -2.01
Lmx1bO88609 Gm25470-201ENSMUST00000175576 111 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 Gm25457-201ENSMUST00000179509 107 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 Gm27793-201ENSMUST00000183405 76 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 Gm27851-201ENSMUST00000183529 63 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 Mir7118-201ENSMUST00000197760 61 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 Gm26454-201ENSMUST00000082682 107 ntBASIC2.52□□□□□ -2.01
Lmx1bO88609 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Lmx1bO88609 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Lmx1bO88609 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Lmx1bO88609 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Lmx1bO88609 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Lmx1bO88609 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Lmx1bO88609 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Lmx1bO88609 Mir344c-201ENSMUST00000103919 92 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm24283-201ENSMUST00000104233 107 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm26247-201ENSMUST00000116702 91 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm25625-201ENSMUST00000157221 96 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm24440-201ENSMUST00000157236 63 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm23895-201ENSMUST00000158108 160 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm25920-201ENSMUST00000158307 99 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm24512-201ENSMUST00000174963 65 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.51□□□□□ -2.01
Lmx1bO88609 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm44256-201ENSMUST00000203304 335 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm34314-201ENSMUST00000203622 367 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.51□□□□□ -2.01
Lmx1bO88609 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.51□□□□□ -2.01
Lmx1bO88609 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm18617-201ENSMUST00000222311 259 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm25634-201ENSMUST00000082667 105 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Gm24453-201ENSMUST00000083346 76 ntBASIC2.51□□□□□ -2.01
Lmx1bO88609 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.51□□□□□ -2.01
Lmx1bO88609 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Lmx1bO88609 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Lmx1bO88609 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Lmx1bO88609 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Lmx1bO88609 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Lmx1bO88609 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Lmx1bO88609 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Lmx1bO88609 Gm23128-201ENSMUST00000104257 132 ntBASIC2.5□□□□□ -2.01
Lmx1bO88609 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.5□□□□□ -2.01
Lmx1bO88609 Gm22382-201ENSMUST00000158185 130 ntBASIC2.5□□□□□ -2.01
Lmx1bO88609 Mir6402-201ENSMUST00000183406 80 ntBASIC2.5□□□□□ -2.01
Lmx1bO88609 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.5□□□□□ -2.01
Lmx1bO88609 Gm23128-202ENSMUST00000196578 133 ntBASIC2.5□□□□□ -2.01
Lmx1bO88609 Gm33866-201ENSMUST00000196911 289 ntBASIC2.5□□□□□ -2.01
Lmx1bO88609 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.5□□□□□ -2.01
Lmx1bO88609 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.5□□□□□ -2.01
Lmx1bO88609 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.5□□□□□ -2.01
Lmx1bO88609 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Lmx1bO88609 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Lmx1bO88609 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.49□□□□□ -2.01
Lmx1bO88609 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Lmx1bO88609 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Lmx1bO88609 Gm24443-201ENSMUST00000157242 132 ntBASIC2.49□□□□□ -2.01
Lmx1bO88609 Gm23535-201ENSMUST00000157542 106 ntBASIC2.49□□□□□ -2.01
Lmx1bO88609 Gm26482-201ENSMUST00000158015 62 ntBASIC2.49□□□□□ -2.01
Lmx1bO88609 Gm22606-201ENSMUST00000158290 103 ntBASIC2.49□□□□□ -2.01
Lmx1bO88609 Gm25716-201ENSMUST00000158628 104 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms