Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
BckdkO55028 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.13□□□□□ -2.23
BckdkO55028 Gm26314-201ENSMUST00000083891 107 ntBASIC1.13□□□□□ -2.23
BckdkO55028 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
BckdkO55028 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.13□□□□□ -2.23
BckdkO55028 BC022960-201ENSMUST00000119987 1815 ntBASIC1.12□□□□□ -2.23
BckdkO55028 Gm23766-201ENSMUST00000103894 80 ntBASIC1.12□□□□□ -2.23
BckdkO55028 Gm15214-201ENSMUST00000122155 470 ntBASIC1.12□□□□□ -2.23
BckdkO55028 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.12□□□□□ -2.23
BckdkO55028 Gm22537-201ENSMUST00000158172 199 ntBASIC1.12□□□□□ -2.23
BckdkO55028 Gm26363-201ENSMUST00000158866 83 ntBASIC1.12□□□□□ -2.23
BckdkO55028 Gm23339-201ENSMUST00000158962 139 ntBASIC1.12□□□□□ -2.23
BckdkO55028 Gm24366-201ENSMUST00000175383 86 ntBASIC1.12□□□□□ -2.23
BckdkO55028 Gm26435-201ENSMUST00000179026 107 ntBASIC1.12□□□□□ -2.23
BckdkO55028 Gm28648-201ENSMUST00000190092 343 ntBASIC1.12□□□□□ -2.23
BckdkO55028 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.12□□□□□ -2.23
BckdkO55028 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.12□□□□□ -2.23
BckdkO55028 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.12□□□□□ -2.23
BckdkO55028 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
BckdkO55028 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm22944-201ENSMUST00000158662 133 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm22663-201ENSMUST00000158721 102 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm24510-201ENSMUST00000174965 94 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm23636-201ENSMUST00000175070 95 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28110-201ENSMUST00000185782 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm29057-201ENSMUST00000186468 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28737-201ENSMUST00000186808 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm29147-201ENSMUST00000186846 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm29118-201ENSMUST00000186908 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28433-201ENSMUST00000187085 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm29227-201ENSMUST00000187139 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28759-201ENSMUST00000187621 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28831-201ENSMUST00000187739 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm29034-201ENSMUST00000188099 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28752-201ENSMUST00000188340 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28569-201ENSMUST00000188748 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28120-201ENSMUST00000188812 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28369-201ENSMUST00000188993 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28537-201ENSMUST00000189026 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28861-201ENSMUST00000189681 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28717-201ENSMUST00000189950 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm29180-201ENSMUST00000190003 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm29575-201ENSMUST00000190597 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm29631-201ENSMUST00000191065 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm28160-201ENSMUST00000191229 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm29469-201ENSMUST00000191448 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.11□□□□□ -2.23
BckdkO55028 Gm37129-201ENSMUST00000195791 315 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.11□□□□□ -2.23
BckdkO55028 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.11□□□□□ -2.23
BckdkO55028 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.11□□□□□ -2.23
BckdkO55028 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Snord68-201ENSMUST00000082516 86 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm25357-201ENSMUST00000082745 72 ntBASIC1.11□□□□□ -2.23
BckdkO55028 Gm9059-201ENSMUST00000118319 183 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm11512-201ENSMUST00000119669 663 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm11862-201ENSMUST00000119678 659 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm15529-201ENSMUST00000121833 994 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm11358-201ENSMUST00000122310 373 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm23535-201ENSMUST00000157542 106 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm22485-201ENSMUST00000157990 109 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Mir7j-201ENSMUST00000184427 122 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm29661-201ENSMUST00000186781 315 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm29308-201ENSMUST00000188863 315 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.1□□□□□ -2.23
BckdkO55028 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.1□□□□□ -2.23
BckdkO55028 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.1□□□□□ -2.23
BckdkO55028 Gm18113-201ENSMUST00000220630 303 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm23245-201ENSMUST00000083370 135 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Gm25409-201ENSMUST00000083764 131 ntBASIC1.1□□□□□ -2.23
BckdkO55028 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
BckdkO55028 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
BckdkO55028 Gm13992-201ENSMUST00000120558 156 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm24379-201ENSMUST00000122695 86 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.09□□□□□ -2.23
BckdkO55028 Gm23328-201ENSMUST00000157418 132 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm22164-201ENSMUST00000158413 106 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm24085-201ENSMUST00000175172 116 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm23379-201ENSMUST00000180026 107 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Mir7063-201ENSMUST00000184158 91 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.09□□□□□ -2.23
BckdkO55028 Gm42774-201ENSMUST00000198854 283 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm43993-201ENSMUST00000203972 247 ntBASIC1.09□□□□□ -2.23
BckdkO55028 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
BckdkO55028 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm22980-201ENSMUST00000082608 70 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Mir211-201ENSMUST00000083651 106 ntBASIC1.09□□□□□ -2.23
BckdkO55028 Gm25207-201ENSMUST00000093745 107 ntBASIC1.09□□□□□ -2.23
BckdkO55028 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.09□□□□□ -2.24
BckdkO55028 Gm25414-201ENSMUST00000101814 107 ntBASIC1.08□□□□□ -2.24
BckdkO55028 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
BckdkO55028 Gm14293-201ENSMUST00000118528 577 ntBASIC1.08□□□□□ -2.24
BckdkO55028 Gm14269-201ENSMUST00000120455 306 ntBASIC1.08□□□□□ -2.24
BckdkO55028 Gm13341-201ENSMUST00000120780 672 ntBASIC1.08□□□□□ -2.24
BckdkO55028 Gm24005-201ENSMUST00000158459 296 ntBASIC1.08□□□□□ -2.24
BckdkO55028 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.08□□□□□ -2.24
BckdkO55028 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 193.7 ms