Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Smarce1O54941 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Gm24656-201ENSMUST00000177548 132 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Gm25450-201ENSMUST00000179144 107 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Mir6995-201ENSMUST00000183658 71 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Mir7021-201ENSMUST00000197026 63 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Mir1291-201ENSMUST00000199842 117 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Gm25130-201ENSMUST00000082650 156 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Snora34-201ENSMUST00000083402 138 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.22□□□□□ -2.05
Smarce1O54941 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Smarce1O54941 Mir344e-201ENSMUST00000104677 66 ntBASIC2.21□□□□□ -2.06
Smarce1O54941 Gm25529-201ENSMUST00000104850 92 ntBASIC2.21□□□□□ -2.06
Smarce1O54941 Gm12837-201ENSMUST00000120131 373 ntBASIC2.21□□□□□ -2.06
Smarce1O54941 Gm25115-201ENSMUST00000157187 140 ntBASIC2.21□□□□□ -2.06
Smarce1O54941 Gm22814-201ENSMUST00000157452 104 ntBASIC2.21□□□□□ -2.06
Smarce1O54941 Gm27878-201ENSMUST00000184000 106 ntBASIC2.21□□□□□ -2.06
Smarce1O54941 Gm29665-201ENSMUST00000191457 528 ntBASIC2.21□□□□□ -2.06
Smarce1O54941 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.21□□□□□ -2.06
Smarce1O54941 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Smarce1O54941 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Smarce1O54941 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Smarce1O54941 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.21□□□□□ -2.06
Smarce1O54941 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Smarce1O54941 Gm23759-201ENSMUST00000158351 268 ntBASIC2.2□□□□□ -2.06
Smarce1O54941 Gm26157-201ENSMUST00000158974 126 ntBASIC2.2□□□□□ -2.06
Smarce1O54941 Gm37778-201ENSMUST00000191732 190 ntBASIC2.2□□□□□ -2.06
Smarce1O54941 Mir376a-201ENSMUST00000197584 68 ntBASIC2.2□□□□□ -2.06
Smarce1O54941 Mir7227-201ENSMUST00000200408 59 ntBASIC2.2□□□□□ -2.06
Smarce1O54941 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.2□□□□□ -2.06
Smarce1O54941 Gm24764-201ENSMUST00000083686 199 ntBASIC2.2□□□□□ -2.06
Smarce1O54941 Gm23845-201ENSMUST00000083834 152 ntBASIC2.2□□□□□ -2.06
Smarce1O54941 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Smarce1O54941 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.19□□□□□ -2.06
Smarce1O54941 Gm11854-201ENSMUST00000117839 446 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Gm15002-201ENSMUST00000118406 452 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Gm23858-201ENSMUST00000158384 106 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Gm17067-202ENSMUST00000180131 123 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Mir6901-201ENSMUST00000185062 62 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Gm37081-201ENSMUST00000192034 196 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Gm43865-201ENSMUST00000204721 127 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Gm45386-201ENSMUST00000210194 218 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Gm25793-201ENSMUST00000083287 107 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Mir29c-201ENSMUST00000083614 88 ntBASIC2.19□□□□□ -2.06
Smarce1O54941 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Smarce1O54941 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.18□□□□□ -2.06
Smarce1O54941 Gm24837-201ENSMUST00000158683 81 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Gm22448-201ENSMUST00000179254 107 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Gm27997-201ENSMUST00000184942 69 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Gm44909-201ENSMUST00000208756 165 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Gm45296-201ENSMUST00000209625 205 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Gm25930-201ENSMUST00000082785 107 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Gm24316-201ENSMUST00000083041 107 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Gm26175-201ENSMUST00000083794 131 ntBASIC2.18□□□□□ -2.06
Smarce1O54941 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Smarce1O54941 Gm24068-201ENSMUST00000104513 132 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Gm11862-201ENSMUST00000119678 659 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Gm13725-201ENSMUST00000122139 207 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Smarce1O54941 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Smarce1O54941 Mir1936-201ENSMUST00000158699 93 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Gm24572-201ENSMUST00000175505 88 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Gm20144-201ENSMUST00000203031 165 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Gm45013-201ENSMUST00000206883 178 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Gm24355-201ENSMUST00000082858 122 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Mir300-201ENSMUST00000083485 79 ntBASIC2.17□□□□□ -2.06
Smarce1O54941 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Smarce1O54941 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Gm23941-201ENSMUST00000101953 107 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Gm13714-201ENSMUST00000117313 221 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Gm15692-201ENSMUST00000152173 352 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Gm24858-201ENSMUST00000158058 323 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Gm24501-201ENSMUST00000158452 62 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Gm25658-201ENSMUST00000158472 128 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Gm23579-201ENSMUST00000158528 103 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Gm23055-201ENSMUST00000082805 94 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Gm24977-201ENSMUST00000083106 163 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Mir301-201ENSMUST00000083655 86 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.16□□□□□ -2.06
Smarce1O54941 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Smarce1O54941 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Smarce1O54941 Gm11794-201ENSMUST00000119446 237 ntBASIC2.15□□□□□ -2.07
Smarce1O54941 Gm15281-201ENSMUST00000125181 351 ntBASIC2.15□□□□□ -2.07
Smarce1O54941 Gm23983-201ENSMUST00000157142 114 ntBASIC2.15□□□□□ -2.07
Smarce1O54941 Gm22215-201ENSMUST00000157558 96 ntBASIC2.15□□□□□ -2.07
Smarce1O54941 Mir3092-201ENSMUST00000174954 96 ntBASIC2.15□□□□□ -2.07
Smarce1O54941 Gm37377-201ENSMUST00000191733 304 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms