Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Mir1936-201ENSMUST00000158699 93 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 Gm22802-201ENSMUST00000175621 89 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 Gm25253-201ENSMUST00000179958 107 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 Gm28435-201ENSMUST00000185496 108 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.33□□□□□ -2.36
Hmgb3O54879 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 AC167192.4-201ENSMUST00000224087 993 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 Gm24038-201ENSMUST00000082872 159 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 Gm25896-201ENSMUST00000083713 136 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.33□□□□□ -2.36
Hmgb3O54879 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Hmgb3O54879 Gm22545-201ENSMUST00000104350 132 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 Gm14793-201ENSMUST00000118739 311 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 Gm14884-201ENSMUST00000120456 196 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 Gm23981-201ENSMUST00000157136 106 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 Gm22279-201ENSMUST00000157200 93 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 Gm23605-201ENSMUST00000157255 127 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 Snora24-201ENSMUST00000174989 130 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 Mir6364-201ENSMUST00000183396 86 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 AC102291.2-201ENSMUST00000228083 367 ntBASIC0.32□□□□□ -2.36
Hmgb3O54879 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Hmgb3O54879 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
Hmgb3O54879 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 Gm22228-201ENSMUST00000157364 101 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 Gm24418-201ENSMUST00000177597 79 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 Gm24639-201ENSMUST00000178518 79 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 Gm23076-201ENSMUST00000179082 79 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 Gm25077-201ENSMUST00000179157 79 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 Mir7052-201ENSMUST00000184821 65 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 Gm35212-201ENSMUST00000196672 606 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 Gm11351-202ENSMUST00000225724 478 ntBASIC0.31□□□□□ -2.36
Hmgb3O54879 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Hmgb3O54879 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm26303-201ENSMUST00000116845 119 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm13804-201ENSMUST00000119552 172 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm22308-201ENSMUST00000177609 107 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm28439-201ENSMUST00000187714 876 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm28862-201ENSMUST00000188246 163 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm44462-201ENSMUST00000199696 129 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm44921-201ENSMUST00000205290 301 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm34783-201ENSMUST00000209159 303 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.3□□□□□ -2.36
Hmgb3O54879 Gm25901-201ENSMUST00000158494 130 ntBASIC0.29□□□□□ -2.36
Hmgb3O54879 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Hmgb3O54879 Gm20257-202ENSMUST00000188643 130 ntBASIC0.29□□□□□ -2.36
Hmgb3O54879 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC0.29□□□□□ -2.36
Hmgb3O54879 Gm28414-201ENSMUST00000190111 294 ntBASIC0.29□□□□□ -2.36
Hmgb3O54879 Mir691-201ENSMUST00000199719 78 ntBASIC0.29□□□□□ -2.36
Hmgb3O54879 Gm43911-201ENSMUST00000203097 76 ntBASIC0.29□□□□□ -2.36
Hmgb3O54879 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Hmgb3O54879 Gm24920-201ENSMUST00000083018 85 ntBASIC0.29□□□□□ -2.36
Hmgb3O54879 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Hmgb3O54879 Gm24596-201ENSMUST00000122504 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm24584-201ENSMUST00000157972 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm3027-201ENSMUST00000167579 451 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25750-201ENSMUST00000175483 112 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25211-201ENSMUST00000177553 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm24540-201ENSMUST00000177627 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25256-201ENSMUST00000177746 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm23725-201ENSMUST00000177876 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm22822-201ENSMUST00000177941 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Rnu6-201ENSMUST00000178023 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm23151-201ENSMUST00000178061 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25245-201ENSMUST00000178139 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm24753-201ENSMUST00000178183 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25829-201ENSMUST00000178275 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm22092-201ENSMUST00000178290 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm24486-201ENSMUST00000178420 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm23217-201ENSMUST00000178482 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm26245-201ENSMUST00000178491 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm23610-201ENSMUST00000178659 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm23092-201ENSMUST00000178688 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25709-201ENSMUST00000178844 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25547-201ENSMUST00000178877 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25312-201ENSMUST00000178972 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm24722-201ENSMUST00000179017 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm22969-201ENSMUST00000179018 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25101-201ENSMUST00000179057 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm26378-201ENSMUST00000179093 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm24873-201ENSMUST00000179101 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm23934-201ENSMUST00000179111 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm22623-201ENSMUST00000179244 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25737-201ENSMUST00000179274 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm22618-201ENSMUST00000179376 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm24182-201ENSMUST00000179419 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm24242-201ENSMUST00000179440 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm24863-201ENSMUST00000179499 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm25064-201ENSMUST00000179535 107 ntBASIC0.28□□□□□ -2.36
Hmgb3O54879 Gm26295-201ENSMUST00000179690 107 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms