Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
DffbO54788 Gm25280-201ENSMUST00000157269 101 ntBASIC2.24□□□□□ -2.05
DffbO54788 Gm22538-201ENSMUST00000158169 299 ntBASIC2.24□□□□□ -2.05
DffbO54788 Gm24053-201ENSMUST00000158620 105 ntBASIC2.24□□□□□ -2.05
DffbO54788 Gm20630-201ENSMUST00000177387 551 ntBASIC2.24□□□□□ -2.05
DffbO54788 Gm25615-201ENSMUST00000177836 94 ntBASIC2.24□□□□□ -2.05
DffbO54788 Gm27793-201ENSMUST00000183405 76 ntBASIC2.24□□□□□ -2.05
DffbO54788 Mir7062-201ENSMUST00000185038 66 ntBASIC2.24□□□□□ -2.05
DffbO54788 Gm37918-201ENSMUST00000192071 120 ntBASIC2.24□□□□□ -2.05
DffbO54788 Gm44182-201ENSMUST00000204052 115 ntBASIC2.24□□□□□ -2.05
DffbO54788 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.24□□□□□ -2.05
DffbO54788 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
DffbO54788 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
DffbO54788 Gm25565-201ENSMUST00000104605 105 ntBASIC2.23□□□□□ -2.05
DffbO54788 Gm25808-201ENSMUST00000122784 284 ntBASIC2.23□□□□□ -2.05
DffbO54788 Gm22281-201ENSMUST00000157198 103 ntBASIC2.23□□□□□ -2.05
DffbO54788 Gm22141-201ENSMUST00000157403 277 ntBASIC2.23□□□□□ -2.05
DffbO54788 Gm23536-201ENSMUST00000157541 134 ntBASIC2.23□□□□□ -2.05
DffbO54788 Gm23219-201ENSMUST00000158123 87 ntBASIC2.23□□□□□ -2.05
DffbO54788 Gm25749-201ENSMUST00000175485 111 ntBASIC2.23□□□□□ -2.05
DffbO54788 Gm27991-201ENSMUST00000184804 137 ntBASIC2.23□□□□□ -2.05
DffbO54788 Gm29022-201ENSMUST00000190702 225 ntBASIC2.23□□□□□ -2.05
DffbO54788 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.23□□□□□ -2.05
DffbO54788 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
DffbO54788 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
DffbO54788 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
DffbO54788 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.22□□□□□ -2.05
DffbO54788 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
DffbO54788 Gm23472-201ENSMUST00000101806 191 ntBASIC2.22□□□□□ -2.05
DffbO54788 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
DffbO54788 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm14775-201ENSMUST00000122089 310 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm26411-201ENSMUST00000157668 107 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm22097-201ENSMUST00000157929 278 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm24497-201ENSMUST00000177868 191 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm28992-201ENSMUST00000190534 139 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm37081-201ENSMUST00000192034 196 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm42774-201ENSMUST00000198854 283 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm44482-201ENSMUST00000199232 103 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm18346-201ENSMUST00000216782 325 ntBASIC2.22□□□□□ -2.05
DffbO54788 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm11351-202ENSMUST00000225724 478 ntBASIC2.22□□□□□ -2.05
DffbO54788 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm23444-201ENSMUST00000082922 191 ntBASIC2.22□□□□□ -2.05
DffbO54788 Gm25482-201ENSMUST00000083225 107 ntBASIC2.22□□□□□ -2.05
DffbO54788 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
DffbO54788 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
DffbO54788 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
DffbO54788 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
DffbO54788 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
DffbO54788 Mir541-201ENSMUST00000102097 90 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm23492-201ENSMUST00000116837 115 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm15986-201ENSMUST00000122153 400 ntBASIC2.21□□□□□ -2.06
DffbO54788 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.21□□□□□ -2.06
DffbO54788 Gm25961-201ENSMUST00000157174 135 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm24440-201ENSMUST00000157236 63 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm23324-201ENSMUST00000157421 131 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm28020-201ENSMUST00000157739 67 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm24958-201ENSMUST00000158009 97 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm25488-201ENSMUST00000158728 118 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm24512-201ENSMUST00000174963 65 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm23002-201ENSMUST00000179221 107 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm37715-201ENSMUST00000193206 235 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm37746-201ENSMUST00000193249 198 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.21□□□□□ -2.06
DffbO54788 Gm44352-201ENSMUST00000196358 110 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm44533-201ENSMUST00000207782 268 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm44564-201ENSMUST00000207985 180 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm25124-201ENSMUST00000083345 164 ntBASIC2.21□□□□□ -2.06
DffbO54788 Mir340-201ENSMUST00000083483 98 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm24817-201ENSMUST00000093672 105 ntBASIC2.21□□□□□ -2.06
DffbO54788 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.21□□□□□ -2.06
DffbO54788 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
DffbO54788 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
DffbO54788 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
DffbO54788 Gm24283-201ENSMUST00000104233 107 ntBASIC2.2□□□□□ -2.06
DffbO54788 Gm24068-201ENSMUST00000104513 132 ntBASIC2.2□□□□□ -2.06
DffbO54788 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.2□□□□□ -2.06
DffbO54788 Gm23892-201ENSMUST00000158105 130 ntBASIC2.2□□□□□ -2.06
DffbO54788 Gm24813-201ENSMUST00000175310 84 ntBASIC2.2□□□□□ -2.06
DffbO54788 Mir3965-201ENSMUST00000175570 69 ntBASIC2.2□□□□□ -2.06
DffbO54788 Gm30534-201ENSMUST00000217928 207 ntBASIC2.2□□□□□ -2.06
DffbO54788 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.2□□□□□ -2.06
DffbO54788 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.2□□□□□ -2.06
DffbO54788 Gm24625-201ENSMUST00000082622 130 ntBASIC2.2□□□□□ -2.06
DffbO54788 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
DffbO54788 Gm24640-201ENSMUST00000116949 126 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm22626-201ENSMUST00000116990 126 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm12417-201ENSMUST00000119153 403 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm15162-201ENSMUST00000119325 283 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm12143-201ENSMUST00000119666 332 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm22145-201ENSMUST00000157396 148 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm23858-201ENSMUST00000158384 106 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm23268-201ENSMUST00000175494 78 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm24761-201ENSMUST00000179589 127 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm24488-201ENSMUST00000179934 127 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm25701-201ENSMUST00000179988 127 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm26431-201ENSMUST00000180199 127 ntBASIC2.19□□□□□ -2.06
DffbO54788 Mir6917-201ENSMUST00000184111 61 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms