Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.29□□□□□ -2.36
DffaO54786 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.29□□□□□ -2.36
DffaO54786 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.29□□□□□ -2.36
DffaO54786 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.29□□□□□ -2.36
DffaO54786 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
DffaO54786 Gm25138-201ENSMUST00000083248 136 ntBASIC0.29□□□□□ -2.36
DffaO54786 Gm25650-201ENSMUST00000083784 162 ntBASIC0.29□□□□□ -2.36
DffaO54786 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.28□□□□□ -2.36
DffaO54786 Gm14931-201ENSMUST00000111079 253 ntBASIC0.28□□□□□ -2.36
DffaO54786 Gm26303-201ENSMUST00000116845 119 ntBASIC0.28□□□□□ -2.36
DffaO54786 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.28□□□□□ -2.36
DffaO54786 Gm13153-201ENSMUST00000120969 637 ntBASIC0.28□□□□□ -2.36
DffaO54786 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.28□□□□□ -2.36
DffaO54786 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
DffaO54786 Gm24897-201ENSMUST00000179033 107 ntBASIC0.28□□□□□ -2.36
DffaO54786 Gm24862-201ENSMUST00000179103 79 ntBASIC0.28□□□□□ -2.36
DffaO54786 Gm23310-201ENSMUST00000179105 79 ntBASIC0.28□□□□□ -2.36
DffaO54786 Gm25461-201ENSMUST00000179293 79 ntBASIC0.28□□□□□ -2.36
DffaO54786 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.28□□□□□ -2.36
DffaO54786 Gm44449-201ENSMUST00000203610 153 ntBASIC0.28□□□□□ -2.36
DffaO54786 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.28□□□□□ -2.36
DffaO54786 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.28□□□□□ -2.37
DffaO54786 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.28□□□□□ -2.37
DffaO54786 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.27□□□□□ -2.37
DffaO54786 Gm26377-201ENSMUST00000102184 108 ntBASIC0.27□□□□□ -2.37
DffaO54786 Mir466n-201ENSMUST00000104798 94 ntBASIC0.27□□□□□ -2.37
DffaO54786 Gm9059-201ENSMUST00000118319 183 ntBASIC0.27□□□□□ -2.37
DffaO54786 Gm14761-201ENSMUST00000121363 262 ntBASIC0.27□□□□□ -2.37
DffaO54786 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.27□□□□□ -2.37
DffaO54786 Gm22584-201ENSMUST00000177935 92 ntBASIC0.27□□□□□ -2.37
DffaO54786 Gm26435-201ENSMUST00000179026 107 ntBASIC0.27□□□□□ -2.37
DffaO54786 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.27□□□□□ -2.37
DffaO54786 Gm44548-201ENSMUST00000208929 192 ntBASIC0.27□□□□□ -2.37
DffaO54786 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
DffaO54786 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.27□□□□□ -2.37
DffaO54786 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.27□□□□□ -2.37
DffaO54786 Gm11351-202ENSMUST00000225724 478 ntBASIC0.27□□□□□ -2.37
DffaO54786 Gm22508-201ENSMUST00000082772 110 ntBASIC0.27□□□□□ -2.37
DffaO54786 Gm13967-201ENSMUST00000120404 380 ntBASIC0.26□□□□□ -2.37
DffaO54786 Gm6272-201ENSMUST00000121256 171 ntBASIC0.26□□□□□ -2.37
DffaO54786 Mir6985-201ENSMUST00000184641 61 ntBASIC0.26□□□□□ -2.37
DffaO54786 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC0.26□□□□□ -2.37
DffaO54786 Gm44870-201ENSMUST00000207291 357 ntBASIC0.26□□□□□ -2.37
DffaO54786 AC157654.1-201ENSMUST00000224130 820 ntBASIC0.26□□□□□ -2.37
DffaO54786 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.26□□□□□ -2.37
DffaO54786 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.26□□□□□ -2.37
DffaO54786 Gm24430-201ENSMUST00000104077 104 ntBASIC0.25□□□□□ -2.37
DffaO54786 Gm11859-201ENSMUST00000118099 455 ntBASIC0.25□□□□□ -2.37
DffaO54786 Gm11334-201ENSMUST00000121969 156 ntBASIC0.25□□□□□ -2.37
DffaO54786 Gm22186-201ENSMUST00000157822 122 ntBASIC0.25□□□□□ -2.37
DffaO54786 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC0.25□□□□□ -2.37
DffaO54786 Gm20257-202ENSMUST00000188643 130 ntBASIC0.25□□□□□ -2.37
DffaO54786 Gm42805-201ENSMUST00000196158 276 ntBASIC0.25□□□□□ -2.37
DffaO54786 Gm44137-201ENSMUST00000203670 367 ntBASIC0.25□□□□□ -2.37
DffaO54786 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.25□□□□□ -2.37
DffaO54786 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.25□□□□□ -2.37
DffaO54786 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.25□□□□□ -2.37
DffaO54786 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.25□□□□□ -2.37
DffaO54786 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.24□□□□□ -2.37
DffaO54786 Gm23130-201ENSMUST00000104252 74 ntBASIC0.24□□□□□ -2.37
DffaO54786 Gm20689-201ENSMUST00000176033 279 ntBASIC0.24□□□□□ -2.37
DffaO54786 Gm27289-201ENSMUST00000183341 82 ntBASIC0.24□□□□□ -2.37
DffaO54786 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.24□□□□□ -2.37
DffaO54786 Gm42719-201ENSMUST00000197393 355 ntBASIC0.24□□□□□ -2.37
DffaO54786 Gm42164-201ENSMUST00000198881 379 ntBASIC0.24□□□□□ -2.37
DffaO54786 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.24□□□□□ -2.37
DffaO54786 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.24□□□□□ -2.37
DffaO54786 Gm24261-201ENSMUST00000083744 104 ntBASIC0.24□□□□□ -2.37
DffaO54786 Gm23503-201ENSMUST00000083903 107 ntBASIC0.24□□□□□ -2.37
DffaO54786 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
DffaO54786 Gm23422-201ENSMUST00000102000 107 ntBASIC0.23□□□□□ -2.37
DffaO54786 Gm22597-201ENSMUST00000157602 80 ntBASIC0.23□□□□□ -2.37
DffaO54786 Gm17054-201ENSMUST00000169811 259 ntBASIC0.23□□□□□ -2.37
DffaO54786 Mir6389-201ENSMUST00000183661 102 ntBASIC0.23□□□□□ -2.37
DffaO54786 Gm44921-201ENSMUST00000205290 301 ntBASIC0.23□□□□□ -2.37
DffaO54786 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.23□□□□□ -2.37
DffaO54786 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.23□□□□□ -2.37
DffaO54786 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.23□□□□□ -2.37
DffaO54786 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.23□□□□□ -2.37
DffaO54786 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.23□□□□□ -2.37
DffaO54786 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
DffaO54786 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.22□□□□□ -2.37
DffaO54786 Gm23535-201ENSMUST00000157542 106 ntBASIC0.22□□□□□ -2.37
DffaO54786 Gm25384-201ENSMUST00000157807 105 ntBASIC0.22□□□□□ -2.37
DffaO54786 Gm24963-201ENSMUST00000157916 144 ntBASIC0.22□□□□□ -2.37
DffaO54786 Gm24306-201ENSMUST00000180229 79 ntBASIC0.22□□□□□ -2.37
DffaO54786 Gm27717-201ENSMUST00000183933 151 ntBASIC0.22□□□□□ -2.37
DffaO54786 Gm43114-201ENSMUST00000198298 343 ntBASIC0.22□□□□□ -2.37
DffaO54786 Mir219b-201ENSMUST00000198317 65 ntBASIC0.22□□□□□ -2.37
DffaO54786 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.22□□□□□ -2.37
DffaO54786 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.22□□□□□ -2.37
DffaO54786 Gm45704-201ENSMUST00000212582 403 ntBASIC0.22□□□□□ -2.37
DffaO54786 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.22□□□□□ -2.37
DffaO54786 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.22□□□□□ -2.37
DffaO54786 Gm26326-201ENSMUST00000083070 129 ntBASIC0.22□□□□□ -2.37
DffaO54786 Gm12433-201ENSMUST00000119659 255 ntBASIC0.21□□□□□ -2.38
DffaO54786 Gm14922-201ENSMUST00000121131 163 ntBASIC0.21□□□□□ -2.38
DffaO54786 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.21□□□□□ -2.38
DffaO54786 Gm24476-201ENSMUST00000157437 131 ntBASIC0.21□□□□□ -2.38
DffaO54786 Gm22706-201ENSMUST00000157907 112 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms