Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm7950-201ENSMUST00000179633 468 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm14598-201ENSMUST00000180109 468 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm14625-201ENSMUST00000180231 468 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm27490-201ENSMUST00000184754 128 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.52□□□□□ -2.33
Sdc4O35988 Gm37089-201ENSMUST00000195616 129 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.52□□□□□ -2.33
Sdc4O35988 Gm42164-201ENSMUST00000198881 379 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.52□□□□□ -2.33
Sdc4O35988 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.52□□□□□ -2.33
Sdc4O35988 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Sdc4O35988 Gm26457-201ENSMUST00000082678 78 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.52□□□□□ -2.33
Sdc4O35988 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
Sdc4O35988 Mir743b-201ENSMUST00000104751 77 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
Sdc4O35988 Gm12806-201ENSMUST00000119384 268 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm14638-201ENSMUST00000121338 216 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Sdc4O35988 Gm25663-201ENSMUST00000157698 135 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm25557-201ENSMUST00000158084 315 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm25044-201ENSMUST00000158603 104 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm18396-201ENSMUST00000177095 361 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.51□□□□□ -2.33
Sdc4O35988 Gm37399-201ENSMUST00000195224 416 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.51□□□□□ -2.33
Sdc4O35988 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.51□□□□□ -2.33
Sdc4O35988 AC164629.1-201ENSMUST00000220250 1113 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 AC116465.1-201ENSMUST00000220324 235 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 CT009550.5-201ENSMUST00000226286 382 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Sdc4O35988 Gm9795-201ENSMUST00000062156 693 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm5899-201ENSMUST00000071770 270 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Sdc4O35988 Gm22302-201ENSMUST00000082657 106 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm22229-201ENSMUST00000082987 108 ntBASIC0.51□□□□□ -2.33
Sdc4O35988 Gm23126-201ENSMUST00000104260 134 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm24385-201ENSMUST00000122694 350 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm24111-201ENSMUST00000175491 97 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Sdc4O35988 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
Sdc4O35988 Gm28740-201ENSMUST00000186142 215 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.5□□□□□ -2.33
Sdc4O35988 Gm44395-201ENSMUST00000197056 153 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm43993-201ENSMUST00000203972 247 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm40810-201ENSMUST00000219149 253 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm46997-201ENSMUST00000222108 217 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 AC167192.4-201ENSMUST00000224087 993 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 AC120553.1-201ENSMUST00000227313 260 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm24152-201ENSMUST00000082764 163 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm24268-201ENSMUST00000082990 110 ntBASIC0.5□□□□□ -2.33
Sdc4O35988 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC0.5□□□□□ -2.33
Sdc4O35988 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm9059-201ENSMUST00000118319 183 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm4732-201ENSMUST00000118778 473 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm22143-201ENSMUST00000157401 203 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm23106-201ENSMUST00000157554 101 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm24198-201ENSMUST00000157812 108 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm22163-201ENSMUST00000158408 135 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Mir5104-201ENSMUST00000175319 94 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm24418-201ENSMUST00000177597 79 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm24639-201ENSMUST00000178518 79 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm23076-201ENSMUST00000179082 79 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm25077-201ENSMUST00000179157 79 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.49□□□□□ -2.33
Sdc4O35988 Gm28688-201ENSMUST00000187301 268 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm44392-201ENSMUST00000196758 115 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm44052-201ENSMUST00000203382 396 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Sdc4O35988 Gm9973-202ENSMUST00000220926 166 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Gm22572-201ENSMUST00000082985 105 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Sdc4O35988 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.49□□□□□ -2.33
Sdc4O35988 Mir450-2-201ENSMUST00000102444 69 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Gm24172-201ENSMUST00000104127 117 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Gm22591-201ENSMUST00000104243 106 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Gm26173-201ENSMUST00000158416 136 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Gm25491-201ENSMUST00000158733 308 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Gm22403-201ENSMUST00000174919 84 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Gm24510-201ENSMUST00000174965 94 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Gm27420-201ENSMUST00000183823 79 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Gm44326-201ENSMUST00000198226 101 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Gm44990-201ENSMUST00000203922 217 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.48□□□□□ -2.33
Sdc4O35988 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Sdc4O35988 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Sdc4O35988 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.47□□□□□ -2.33
Sdc4O35988 Mir695-201ENSMUST00000102261 109 ntBASIC0.47□□□□□ -2.33
Sdc4O35988 Gm26338-201ENSMUST00000102372 110 ntBASIC0.47□□□□□ -2.33
Sdc4O35988 Gm23836-201ENSMUST00000104434 129 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms