Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm23219-201ENSMUST00000158123 87 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm25051-201ENSMUST00000158602 249 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ebf3O08791 Gm28849-201ENSMUST00000188127 174 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm28330-201ENSMUST00000190353 171 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm37923-201ENSMUST00000191624 161 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm25820-202ENSMUST00000197479 128 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm44477-201ENSMUST00000199661 110 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.52□□□□□ -2.01
Ebf3O08791 Gm45687-201ENSMUST00000209454 155 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ebf3O08791 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Ebf3O08791 Mir669d-201ENSMUST00000104644 121 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm14843-201ENSMUST00000119596 212 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm14069-201ENSMUST00000120815 229 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm26026-201ENSMUST00000122726 123 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm24771-201ENSMUST00000158508 137 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm24106-201ENSMUST00000175498 127 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm23571-201ENSMUST00000180073 127 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm27470-201ENSMUST00000184070 210 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm44476-201ENSMUST00000196225 91 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Mir6925-201ENSMUST00000197857 70 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.51□□□□□ -2.01
Ebf3O08791 Gm23453-201ENSMUST00000083326 106 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm23727-201ENSMUST00000083352 164 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Mir137-201ENSMUST00000083635 73 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ebf3O08791 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Ebf3O08791 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ebf3O08791 Gm23223-201ENSMUST00000158119 127 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm25615-201ENSMUST00000177836 94 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm6801-201ENSMUST00000190697 339 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm43722-201ENSMUST00000196054 124 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm7065-201ENSMUST00000222150 474 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm24204-201ENSMUST00000082950 107 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm22294-201ENSMUST00000083308 104 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm23039-201ENSMUST00000083870 161 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ebf3O08791 Mdga2-203ENSMUST00000113942 423 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm26473-201ENSMUST00000116763 127 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm23990-201ENSMUST00000117031 117 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm15714-201ENSMUST00000117168 250 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.49□□□□□ -2.01
Ebf3O08791 Gm22321-201ENSMUST00000157152 104 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm23277-201ENSMUST00000157914 136 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm24676-201ENSMUST00000158758 75 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm17020-201ENSMUST00000172274 274 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm27465-201ENSMUST00000184290 91 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm27959-201ENSMUST00000185172 111 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm15235-201ENSMUST00000200572 194 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm25130-201ENSMUST00000082650 156 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm23723-201ENSMUST00000082996 132 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Ebf3O08791 Gm13432-201ENSMUST00000118861 241 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm23466-201ENSMUST00000157133 106 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm22215-201ENSMUST00000157558 96 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm22537-201ENSMUST00000158172 199 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm25223-201ENSMUST00000158200 110 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm24726-201ENSMUST00000158232 121 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ebf3O08791 Gm37997-201ENSMUST00000193515 267 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm18341-201ENSMUST00000197538 622 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm36189-201ENSMUST00000204113 523 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm45445-201ENSMUST00000209586 232 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ebf3O08791 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ebf3O08791 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ebf3O08791 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Ebf3O08791 Mir466p-201ENSMUST00000103925 89 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm24132-201ENSMUST00000104745 91 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm24586-201ENSMUST00000116695 89 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm12934-201ENSMUST00000119221 343 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm13913-201ENSMUST00000121126 260 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm25543-201ENSMUST00000122678 312 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm25805-201ENSMUST00000122788 108 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm23600-201ENSMUST00000157260 71 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm23584-201ENSMUST00000157655 129 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm25071-201ENSMUST00000175232 70 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm24799-201ENSMUST00000178431 79 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Mir497-201ENSMUST00000200557 84 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.47□□□□□ -2.01
Ebf3O08791 Gm44524-201ENSMUST00000203899 271 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm18213-201ENSMUST00000207850 178 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm40810-201ENSMUST00000219149 253 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm46993-201ENSMUST00000220708 259 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm9174-201ENSMUST00000078149 255 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm25812-201ENSMUST00000082751 103 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm24152-201ENSMUST00000082764 163 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm26495-201ENSMUST00000083152 137 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms