Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm23219-201ENSMUST00000158123 87 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm25051-201ENSMUST00000158602 249 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ebf3O08791 Gm28849-201ENSMUST00000188127 174 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm28330-201ENSMUST00000190353 171 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm37923-201ENSMUST00000191624 161 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm25820-202ENSMUST00000197479 128 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm44477-201ENSMUST00000199661 110 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.52□□□□□ -2.01
Ebf3O08791 Gm45687-201ENSMUST00000209454 155 ntBASIC2.52□□□□□ -2.01
Ebf3O08791 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ebf3O08791 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Ebf3O08791 Mir669d-201ENSMUST00000104644 121 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm14843-201ENSMUST00000119596 212 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm14069-201ENSMUST00000120815 229 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm26026-201ENSMUST00000122726 123 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm24771-201ENSMUST00000158508 137 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm24106-201ENSMUST00000175498 127 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm23571-201ENSMUST00000180073 127 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm27470-201ENSMUST00000184070 210 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm44476-201ENSMUST00000196225 91 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Mir6925-201ENSMUST00000197857 70 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.51□□□□□ -2.01
Ebf3O08791 Gm23453-201ENSMUST00000083326 106 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Gm23727-201ENSMUST00000083352 164 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Mir137-201ENSMUST00000083635 73 ntBASIC2.51□□□□□ -2.01
Ebf3O08791 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ebf3O08791 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Ebf3O08791 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ebf3O08791 Gm23223-201ENSMUST00000158119 127 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm25615-201ENSMUST00000177836 94 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm6801-201ENSMUST00000190697 339 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm43722-201ENSMUST00000196054 124 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm7065-201ENSMUST00000222150 474 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm24204-201ENSMUST00000082950 107 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm22294-201ENSMUST00000083308 104 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Gm23039-201ENSMUST00000083870 161 ntBASIC2.5□□□□□ -2.01
Ebf3O08791 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ebf3O08791 Mdga2-203ENSMUST00000113942 423 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm26473-201ENSMUST00000116763 127 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm23990-201ENSMUST00000117031 117 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm15714-201ENSMUST00000117168 250 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.49□□□□□ -2.01
Ebf3O08791 Gm22321-201ENSMUST00000157152 104 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm23277-201ENSMUST00000157914 136 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm24676-201ENSMUST00000158758 75 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm17020-201ENSMUST00000172274 274 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm27465-201ENSMUST00000184290 91 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm27959-201ENSMUST00000185172 111 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm15235-201ENSMUST00000200572 194 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm25130-201ENSMUST00000082650 156 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Gm23723-201ENSMUST00000082996 132 ntBASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.49□□□□□ -2.01
Ebf3O08791 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Ebf3O08791 Gm13432-201ENSMUST00000118861 241 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm23466-201ENSMUST00000157133 106 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm22215-201ENSMUST00000157558 96 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm22537-201ENSMUST00000158172 199 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm25223-201ENSMUST00000158200 110 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm24726-201ENSMUST00000158232 121 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ebf3O08791 Gm37997-201ENSMUST00000193515 267 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm18341-201ENSMUST00000197538 622 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm36189-201ENSMUST00000204113 523 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 Gm45445-201ENSMUST00000209586 232 ntBASIC2.48□□□□□ -2.01
Ebf3O08791 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ebf3O08791 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ebf3O08791 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ebf3O08791 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Ebf3O08791 Mir466p-201ENSMUST00000103925 89 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm24132-201ENSMUST00000104745 91 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm24586-201ENSMUST00000116695 89 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm12934-201ENSMUST00000119221 343 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm13913-201ENSMUST00000121126 260 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm25543-201ENSMUST00000122678 312 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm25805-201ENSMUST00000122788 108 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm23600-201ENSMUST00000157260 71 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm23584-201ENSMUST00000157655 129 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm25071-201ENSMUST00000175232 70 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm24799-201ENSMUST00000178431 79 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Mir497-201ENSMUST00000200557 84 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.47□□□□□ -2.01
Ebf3O08791 Gm44524-201ENSMUST00000203899 271 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm18213-201ENSMUST00000207850 178 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm40810-201ENSMUST00000219149 253 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm46993-201ENSMUST00000220708 259 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm9174-201ENSMUST00000078149 255 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm25812-201ENSMUST00000082751 103 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm24152-201ENSMUST00000082764 163 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Gm26495-201ENSMUST00000083152 137 ntBASIC2.47□□□□□ -2.01
Ebf3O08791 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms