Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm24878-201ENSMUST00000158782 104 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm27698-201ENSMUST00000184060 249 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm23615-201ENSMUST00000082602 65 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm26204-201ENSMUST00000082906 107 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm25789-201ENSMUST00000083294 76 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Mir471-201ENSMUST00000093596 67 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm24126-201ENSMUST00000104111 106 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm12351-201ENSMUST00000118727 292 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm26099-201ENSMUST00000157248 109 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm22286-201ENSMUST00000179708 107 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm6060-201ENSMUST00000188671 251 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm24350-202ENSMUST00000198309 132 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm6105-201ENSMUST00000200580 624 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm43901-201ENSMUST00000203247 453 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Shisa8J3QNX5 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm23462-201ENSMUST00000083264 104 ntBASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Shisa8J3QNX5 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm25407-201ENSMUST00000104102 134 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm24283-201ENSMUST00000104233 107 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm23492-201ENSMUST00000116837 115 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm6954-201ENSMUST00000117416 225 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm14069-201ENSMUST00000120815 229 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm23223-201ENSMUST00000158119 127 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm25020-201ENSMUST00000178071 107 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm27928-201ENSMUST00000183747 256 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm15235-201ENSMUST00000200572 194 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gm46993-201ENSMUST00000220708 259 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Shisa8J3QNX5 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm14748-201ENSMUST00000119819 411 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm23588-201ENSMUST00000157659 99 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm22382-201ENSMUST00000158185 130 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm26200-201ENSMUST00000180273 79 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm27582-201ENSMUST00000184084 126 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm32175-201ENSMUST00000193641 346 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm43722-201ENSMUST00000196054 124 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm26265-202ENSMUST00000196326 133 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm44938-201ENSMUST00000208614 427 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm45288-201ENSMUST00000210236 151 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Gm30534-201ENSMUST00000217928 207 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Mir384-201ENSMUST00000083565 88 ntBASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Shisa8J3QNX5 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm23013-201ENSMUST00000104146 106 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm23653-201ENSMUST00000116751 97 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm22713-201ENSMUST00000116895 130 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm15282-201ENSMUST00000117707 300 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm14652-201ENSMUST00000118479 235 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm14775-201ENSMUST00000122089 310 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm25059-201ENSMUST00000157367 117 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm23668-201ENSMUST00000157465 111 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm26482-201ENSMUST00000158015 62 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm23350-201ENSMUST00000158429 103 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm24106-201ENSMUST00000175498 127 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm22800-201ENSMUST00000175627 94 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm20718-201ENSMUST00000176058 259 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm27465-201ENSMUST00000184290 91 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Mir6916-201ENSMUST00000184514 63 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Shisa8J3QNX5 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.28□□□□□ -2.04
Shisa8J3QNX5 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.28□□□□□ -2.05
Shisa8J3QNX5 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Shisa8J3QNX5 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Shisa8J3QNX5 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Shisa8J3QNX5 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Shisa8J3QNX5 Gm26018-201ENSMUST00000104406 128 ntBASIC2.27□□□□□ -2.05
Shisa8J3QNX5 Gm12550-201ENSMUST00000118478 329 ntBASIC2.27□□□□□ -2.05
Shisa8J3QNX5 Gm11356-201ENSMUST00000118974 192 ntBASIC2.27□□□□□ -2.05
Shisa8J3QNX5 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.27□□□□□ -2.05
Shisa8J3QNX5 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.27□□□□□ -2.05
Shisa8J3QNX5 Mir1967-201ENSMUST00000157789 82 ntBASIC2.27□□□□□ -2.05
Shisa8J3QNX5 Gm22767-201ENSMUST00000158365 165 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 196.8 ms