Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm6030-201ENSMUST00000078768 402 ntBASIC3.69□□□□□ -1.82
NpcdF8VQB8 Gm22248-201ENSMUST00000082482 150 ntBASIC3.69□□□□□ -1.82
NpcdF8VQB8 Gm26454-201ENSMUST00000082682 107 ntBASIC3.69□□□□□ -1.82
NpcdF8VQB8 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NpcdF8VQB8 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NpcdF8VQB8 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.69□□□□□ -1.82
NpcdF8VQB8 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NpcdF8VQB8 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NpcdF8VQB8 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NpcdF8VQB8 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NpcdF8VQB8 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 Gm22382-201ENSMUST00000158185 130 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 Gm22384-201ENSMUST00000158187 104 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 Gm25716-201ENSMUST00000158628 104 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 Gm25253-201ENSMUST00000179958 107 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NpcdF8VQB8 Gm44459-201ENSMUST00000203926 160 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.68□□□□□ -1.82
NpcdF8VQB8 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.68□□□□□ -1.82
NpcdF8VQB8 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NpcdF8VQB8 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NpcdF8VQB8 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NpcdF8VQB8 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NpcdF8VQB8 Gm12143-201ENSMUST00000119666 332 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Gm25153-201ENSMUST00000157118 156 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Mir1936-201ENSMUST00000158699 93 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Gm27793-201ENSMUST00000183405 76 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Gm6003-201ENSMUST00000187903 463 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Gm37428-201ENSMUST00000193886 137 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Mir378a-201ENSMUST00000198300 66 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Gm22299-201ENSMUST00000082663 136 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.67□□□□□ -1.82
NpcdF8VQB8 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NpcdF8VQB8 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NpcdF8VQB8 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NpcdF8VQB8 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.66□□□□□ -1.82
NpcdF8VQB8 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NpcdF8VQB8 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NpcdF8VQB8 Gm15497-201ENSMUST00000119137 551 ntBASIC3.66□□□□□ -1.82
NpcdF8VQB8 Gm15365-201ENSMUST00000122392 300 ntBASIC3.66□□□□□ -1.82
NpcdF8VQB8 Gm25059-201ENSMUST00000157367 117 ntBASIC3.66□□□□□ -1.82
NpcdF8VQB8 Gm22075-201ENSMUST00000158599 192 ntBASIC3.66□□□□□ -1.82
NpcdF8VQB8 Gm45445-201ENSMUST00000209586 232 ntBASIC3.66□□□□□ -1.82
NpcdF8VQB8 Gm25204-201ENSMUST00000082843 106 ntBASIC3.66□□□□□ -1.82
NpcdF8VQB8 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
NpcdF8VQB8 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NpcdF8VQB8 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NpcdF8VQB8 Mir693-201ENSMUST00000102187 89 ntBASIC3.65□□□□□ -1.83
NpcdF8VQB8 Gm12926-201ENSMUST00000121158 409 ntBASIC3.65□□□□□ -1.83
NpcdF8VQB8 Gm22281-201ENSMUST00000157198 103 ntBASIC3.65□□□□□ -1.83
NpcdF8VQB8 Gm26482-201ENSMUST00000158015 62 ntBASIC3.65□□□□□ -1.83
NpcdF8VQB8 Gm26097-201ENSMUST00000179642 93 ntBASIC3.65□□□□□ -1.83
NpcdF8VQB8 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NpcdF8VQB8 Gm44476-201ENSMUST00000196225 91 ntBASIC3.65□□□□□ -1.83
NpcdF8VQB8 Gm34314-201ENSMUST00000203622 367 ntBASIC3.65□□□□□ -1.83
NpcdF8VQB8 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.65□□□□□ -1.83
NpcdF8VQB8 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NpcdF8VQB8 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NpcdF8VQB8 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NpcdF8VQB8 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.65□□□□□ -1.83
NpcdF8VQB8 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.65□□□□□ -1.83
NpcdF8VQB8 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 Gm23011-201ENSMUST00000104148 132 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.64□□□□□ -1.83
NpcdF8VQB8 Gm24922-201ENSMUST00000158511 102 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NpcdF8VQB8 Mir3106-201ENSMUST00000175401 82 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NpcdF8VQB8 Gm28992-201ENSMUST00000190534 139 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 Gm25589-201ENSMUST00000082502 166 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.64□□□□□ -1.83
NpcdF8VQB8 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.63□□□□□ -1.83
NpcdF8VQB8 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NpcdF8VQB8 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.63□□□□□ -1.83
NpcdF8VQB8 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NpcdF8VQB8 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
NpcdF8VQB8 Gm24890-201ENSMUST00000104389 102 ntBASIC3.63□□□□□ -1.83
NpcdF8VQB8 Gm11786-201ENSMUST00000120799 155 ntBASIC3.63□□□□□ -1.83
NpcdF8VQB8 Gm25321-201ENSMUST00000122558 102 ntBASIC3.63□□□□□ -1.83
NpcdF8VQB8 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.63□□□□□ -1.83
NpcdF8VQB8 Gm22227-201ENSMUST00000157356 259 ntBASIC3.63□□□□□ -1.83
NpcdF8VQB8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.63□□□□□ -1.83
NpcdF8VQB8 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.63□□□□□ -1.83
NpcdF8VQB8 Gm23136-201ENSMUST00000083425 99 ntBASIC3.63□□□□□ -1.83
NpcdF8VQB8 Gm23040-201ENSMUST00000083869 163 ntBASIC3.63□□□□□ -1.83
NpcdF8VQB8 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.63□□□□□ -1.83
NpcdF8VQB8 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NpcdF8VQB8 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NpcdF8VQB8 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms