Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.82□□□□□ -2.28
Chd3B1AR17 Gm23090-201ENSMUST00000177331 78 ntBASIC0.82□□□□□ -2.28
Chd3B1AR17 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Chd3B1AR17 Mir7077-201ENSMUST00000183991 57 ntBASIC0.82□□□□□ -2.28
Chd3B1AR17 Gm29613-201ENSMUST00000185846 313 ntBASIC0.82□□□□□ -2.28
Chd3B1AR17 Gm29544-201ENSMUST00000188860 313 ntBASIC0.82□□□□□ -2.28
Chd3B1AR17 Gm28808-201ENSMUST00000190978 313 ntBASIC0.82□□□□□ -2.28
Chd3B1AR17 Gm18854-201ENSMUST00000211196 329 ntBASIC0.82□□□□□ -2.28
Chd3B1AR17 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Chd3B1AR17 Gm24490-201ENSMUST00000083803 98 ntBASIC0.82□□□□□ -2.28
Chd3B1AR17 Gm15214-201ENSMUST00000122155 470 ntBASIC0.81□□□□□ -2.28
Chd3B1AR17 Gm22328-201ENSMUST00000158074 112 ntBASIC0.81□□□□□ -2.28
Chd3B1AR17 Gm23208-201ENSMUST00000158666 127 ntBASIC0.81□□□□□ -2.28
Chd3B1AR17 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Chd3B1AR17 Gm28956-201ENSMUST00000189047 427 ntBASIC0.81□□□□□ -2.28
Chd3B1AR17 Gm44446-201ENSMUST00000204864 255 ntBASIC0.81□□□□□ -2.28
Chd3B1AR17 Gm40810-201ENSMUST00000219149 253 ntBASIC0.81□□□□□ -2.28
Chd3B1AR17 Gm26377-201ENSMUST00000102184 108 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm4732-201ENSMUST00000118778 473 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm23111-201ENSMUST00000122652 105 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm23557-201ENSMUST00000157820 138 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm23277-201ENSMUST00000157914 136 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm23317-201ENSMUST00000157999 129 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm24862-201ENSMUST00000179103 79 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm23310-201ENSMUST00000179105 79 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm25461-201ENSMUST00000179293 79 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm25253-201ENSMUST00000179958 107 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm38274-201ENSMUST00000195689 148 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm18696-201ENSMUST00000220103 274 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm23749-201ENSMUST00000104223 131 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm2962-201ENSMUST00000159266 336 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Zfp950-206ENSMUST00000178819 171 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm29005-201ENSMUST00000186773 320 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm37641-201ENSMUST00000193837 239 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm43245-201ENSMUST00000197603 468 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm5010-201ENSMUST00000213131 260 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm24208-201ENSMUST00000082783 135 ntBASIC0.8□□□□□ -2.28
Chd3B1AR17 Gm24172-201ENSMUST00000104127 117 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm25956-201ENSMUST00000175115 217 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm26285-201ENSMUST00000177923 107 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm29134-201ENSMUST00000186579 126 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm28337-201ENSMUST00000190425 666 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm31123-201ENSMUST00000192094 666 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm23622-201ENSMUST00000082460 107 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm25589-201ENSMUST00000082502 166 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm26224-201ENSMUST00000082506 80 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Snord96a-201ENSMUST00000082791 81 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm22229-201ENSMUST00000082987 108 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm23036-201ENSMUST00000157885 99 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm23145-201ENSMUST00000178912 79 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm24390-201ENSMUST00000179578 62 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm28740-201ENSMUST00000186142 215 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm18703-201ENSMUST00000215318 333 ntBASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Chd3B1AR17 Gm22757-201ENSMUST00000102279 96 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm25317-201ENSMUST00000116824 129 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm23184-201ENSMUST00000122594 131 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm26405-201ENSMUST00000158495 100 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm7925-201ENSMUST00000166690 401 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm23725-201ENSMUST00000177876 107 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm22851-201ENSMUST00000178741 94 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm25074-201ENSMUST00000178782 94 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm37361-201ENSMUST00000194345 132 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm18971-201ENSMUST00000197240 374 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm44449-201ENSMUST00000203610 153 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm25475-201ENSMUST00000082825 180 ntBASIC0.78□□□□□ -2.28
Chd3B1AR17 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
Chd3B1AR17 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
Chd3B1AR17 Gm11572-201ENSMUST00000119164 120 ntBASIC0.77□□□□□ -2.29
Chd3B1AR17 Gm22164-201ENSMUST00000158413 106 ntBASIC0.77□□□□□ -2.29
Chd3B1AR17 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms