Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm26435-201ENSMUST00000179026 107 ntBASIC3.2□□□□□ -1.9
Ccdc9bA3KGF9 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc9bA3KGF9 Gm42855-201ENSMUST00000197388 253 ntBASIC3.2□□□□□ -1.9
Ccdc9bA3KGF9 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc9bA3KGF9 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ccdc9bA3KGF9 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Gm24126-201ENSMUST00000104111 106 ntBASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Gm13885-201ENSMUST00000117569 187 ntBASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Gm24595-201ENSMUST00000122501 110 ntBASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Gm24244-201ENSMUST00000157317 130 ntBASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Snord92-201ENSMUST00000175548 85 ntBASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Gm9251-201ENSMUST00000197202 628 ntBASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc9bA3KGF9 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm23772-201ENSMUST00000104433 102 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm12723-201ENSMUST00000120700 451 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm13560-201ENSMUST00000121865 329 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm23324-201ENSMUST00000157421 131 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm25888-201ENSMUST00000157778 302 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm23665-201ENSMUST00000158054 62 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm23257-201ENSMUST00000158322 132 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm26360-201ENSMUST00000158872 103 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm28010-201ENSMUST00000179485 126 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm44052-201ENSMUST00000203382 396 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm45288-201ENSMUST00000210236 151 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm26456-201ENSMUST00000082831 111 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm22681-201ENSMUST00000083853 106 ntBASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Ccdc9bA3KGF9 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Gm22935-201ENSMUST00000103960 104 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Gm14626-201ENSMUST00000117619 216 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Gm23716-201ENSMUST00000157348 144 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Gm22853-201ENSMUST00000174974 131 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Mir3106-201ENSMUST00000175401 82 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Gm4945-201ENSMUST00000075152 453 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Gm26126-201ENSMUST00000083188 164 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc9bA3KGF9 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Mir374b-201ENSMUST00000102314 95 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm24232-201ENSMUST00000104314 132 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm12213-201ENSMUST00000119924 353 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm24598-201ENSMUST00000122510 74 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm22221-201ENSMUST00000157362 103 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm24717-201ENSMUST00000157522 124 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm27592-201ENSMUST00000157729 126 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm24213-201ENSMUST00000158255 258 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm20399-201ENSMUST00000174652 132 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm22174-201ENSMUST00000175050 125 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm22692-201ENSMUST00000175055 125 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm27634-201ENSMUST00000175060 126 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm22460-201ENSMUST00000175269 124 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm24365-201ENSMUST00000175384 125 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm44310-201ENSMUST00000175424 126 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm22639-201ENSMUST00000175591 125 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm24979-201ENSMUST00000178626 126 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm27743-201ENSMUST00000185136 126 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm6801-201ENSMUST00000190697 339 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm37698-201ENSMUST00000192605 463 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm24449-201ENSMUST00000083985 106 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.16□□□□□ -1.9
Ccdc9bA3KGF9 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.15□□□□□ -1.9
Ccdc9bA3KGF9 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Gm23080-201ENSMUST00000157846 103 ntBASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Gm25860-201ENSMUST00000158252 126 ntBASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Gm6947-201ENSMUST00000186254 78 ntBASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Gm38364-201ENSMUST00000191814 179 ntBASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc9bA3KGF9 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc9bA3KGF9 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms