Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm24487-201ENSMUST00000178017 63 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Gm23953-201ENSMUST00000178214 94 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Gm23191-201ENSMUST00000179147 107 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Gm26332-201ENSMUST00000179813 94 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Gm22863-201ENSMUST00000180265 94 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Mir6341-201ENSMUST00000183490 121 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Mir7663-201ENSMUST00000183950 61 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Scn1aA2APX8 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Gm24624-201ENSMUST00000082617 164 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Gm23100-201ENSMUST00000083455 141 ntBASIC1.21□□□□□ -2.22
Scn1aA2APX8 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.2□□□□□ -2.22
Scn1aA2APX8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm24191-201ENSMUST00000157977 122 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm25486-201ENSMUST00000158726 63 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Scn1aA2APX8 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm23627-201ENSMUST00000082459 107 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm22502-201ENSMUST00000082488 107 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm22977-201ENSMUST00000082615 107 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm24149-201ENSMUST00000082757 107 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 BC022960-201ENSMUST00000119987 1815 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Mir1b-201ENSMUST00000117012 122 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm8121-201ENSMUST00000153583 499 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm25961-201ENSMUST00000157174 135 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm25115-201ENSMUST00000157187 140 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm25059-201ENSMUST00000157367 117 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm22315-201ENSMUST00000158010 143 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm16038-201ENSMUST00000159317 193 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm27668-201ENSMUST00000184188 120 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Mir6394-201ENSMUST00000184738 99 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm36953-201ENSMUST00000195295 268 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm18546-201ENSMUST00000197245 676 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm42672-201ENSMUST00000197821 352 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm43865-201ENSMUST00000204721 127 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.2□□□□□ -2.22
Scn1aA2APX8 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.2□□□□□ -2.22
Scn1aA2APX8 Snord42a-201ENSMUST00000082606 65 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm22299-201ENSMUST00000082663 136 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Rny3-201ENSMUST00000083011 102 ntBASIC1.2□□□□□ -2.22
Scn1aA2APX8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.2□□□□□ -2.22
Scn1aA2APX8 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.2□□□□□ -2.22
Scn1aA2APX8 Gm26301-201ENSMUST00000104813 95 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm42606-201ENSMUST00000114209 239 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm14269-201ENSMUST00000120455 306 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm25012-201ENSMUST00000158396 164 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.19□□□□□ -2.22
Scn1aA2APX8 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm24154-201ENSMUST00000175261 130 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm25996-201ENSMUST00000175393 117 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Mir7039-201ENSMUST00000183852 85 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm38109-201ENSMUST00000195386 181 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.19□□□□□ -2.22
Scn1aA2APX8 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Snord14a-201ENSMUST00000082807 87 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm23721-201ENSMUST00000083005 107 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm22972-201ENSMUST00000083297 131 ntBASIC1.19□□□□□ -2.22
Scn1aA2APX8 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
Scn1aA2APX8 Gm13729-201ENSMUST00000120328 406 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm23169-201ENSMUST00000157157 112 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm22862-201ENSMUST00000178593 121 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Mir3961-201ENSMUST00000198795 59 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.18□□□□□ -2.22
Scn1aA2APX8 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Scn1aA2APX8 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm11786-201ENSMUST00000120799 155 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm25054-201ENSMUST00000157370 97 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm22338-201ENSMUST00000157715 129 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm24837-201ENSMUST00000158683 81 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm27722-201ENSMUST00000183908 76 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm27845-201ENSMUST00000184479 114 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm37399-201ENSMUST00000195224 416 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm44655-201ENSMUST00000207768 423 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm5023-201ENSMUST00000217442 587 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm22980-201ENSMUST00000082608 70 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm24152-201ENSMUST00000082764 163 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm22997-201ENSMUST00000082845 107 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Mir429-201ENSMUST00000083493 83 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.18□□□□□ -2.22
Scn1aA2APX8 Gm26249-201ENSMUST00000116708 118 ntBASIC1.17□□□□□ -2.22
Scn1aA2APX8 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.17□□□□□ -2.22
Scn1aA2APX8 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Scn1aA2APX8 Gm25658-201ENSMUST00000158472 128 ntBASIC1.17□□□□□ -2.22
Scn1aA2APX8 Gm23921-201ENSMUST00000175258 107 ntBASIC1.17□□□□□ -2.22
Scn1aA2APX8 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.17□□□□□ -2.22
Scn1aA2APX8 Gm23186-201ENSMUST00000180078 107 ntBASIC1.17□□□□□ -2.22
Scn1aA2APX8 Gm27410-201ENSMUST00000183851 115 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 143.8 ms