Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm25416-201ENSMUST00000104221 107 ntBASIC0.19□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22149-201ENSMUST00000104442 136 ntBASIC0.19□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm11859-201ENSMUST00000118099 455 ntBASIC0.19□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm14765-201ENSMUST00000121954 326 ntBASIC0.19□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22802-201ENSMUST00000175621 89 ntBASIC0.19□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.19□□□□□ -2.38
Trav9-4A0A0B4J1K2 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.19□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22577-201ENSMUST00000083731 109 ntBASIC0.19□□□□□ -2.38
Trav9-4A0A0B4J1K2 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22706-201ENSMUST00000157907 112 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm17164-201ENSMUST00000169013 506 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22633-201ENSMUST00000179834 107 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Mir8116-201ENSMUST00000184134 97 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm19901-201ENSMUST00000192191 495 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm34783-201ENSMUST00000209159 303 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm5899-201ENSMUST00000071770 270 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm23516-201ENSMUST00000093728 107 ntBASIC0.18□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm15529-201ENSMUST00000121833 994 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm25393-201ENSMUST00000157336 285 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm24476-201ENSMUST00000157437 131 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm25413-201ENSMUST00000158544 312 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22584-201ENSMUST00000177935 92 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm26435-201ENSMUST00000179026 107 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm23862-201ENSMUST00000180342 94 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm37757-201ENSMUST00000193072 210 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm45232-201ENSMUST00000207811 162 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22575-201ENSMUST00000082981 110 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm26326-201ENSMUST00000083070 129 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm24045-201ENSMUST00000083113 98 ntBASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.17□□□□□ -2.38
Trav9-4A0A0B4J1K2 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 Mir293-201ENSMUST00000104841 80 ntBASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22431-201ENSMUST00000158545 107 ntBASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm24510-201ENSMUST00000174965 94 ntBASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm42719-201ENSMUST00000197393 355 ntBASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm44870-201ENSMUST00000207291 357 ntBASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 CT030684.2-201ENSMUST00000228946 826 ntBASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.16□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm9059-201ENSMUST00000118319 183 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm6829-201ENSMUST00000119858 360 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm23535-201ENSMUST00000157542 106 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm23387-201ENSMUST00000158586 107 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm20689-201ENSMUST00000176033 279 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Mir224-201ENSMUST00000083608 82 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Mir452-201ENSMUST00000093629 85 ntBASIC0.15□□□□□ -2.39
Trav9-4A0A0B4J1K2 Mir710-201ENSMUST00000102088 110 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm23126-201ENSMUST00000104260 134 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm11334-201ENSMUST00000121969 156 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Mir7039-201ENSMUST00000183852 85 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm27717-201ENSMUST00000183933 151 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm28408-201ENSMUST00000191557 463 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm36984-201ENSMUST00000192770 235 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm44052-201ENSMUST00000203382 396 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.14□□□□□ -2.39
Trav9-4A0A0B4J1K2 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm25557-201ENSMUST00000158084 315 ntBASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm24084-201ENSMUST00000175173 137 ntBASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm37709-201ENSMUST00000195074 600 ntBASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm24261-201ENSMUST00000083744 104 ntBASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm23503-201ENSMUST00000083903 107 ntBASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.13□□□□□ -2.39
Trav9-4A0A0B4J1K2 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm24430-201ENSMUST00000104077 104 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm7916-201ENSMUST00000120325 456 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm43556-201ENSMUST00000196186 681 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.12□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms