Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.86□□□□□ -2.27
Trav11A0A0B4J1J9 Gm25820-202ENSMUST00000197479 128 ntBASIC0.86□□□□□ -2.27
Trav11A0A0B4J1J9 Gm19855-201ENSMUST00000210145 249 ntBASIC0.86□□□□□ -2.27
Trav11A0A0B4J1J9 Gm24625-201ENSMUST00000082622 130 ntBASIC0.86□□□□□ -2.27
Trav11A0A0B4J1J9 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Gm22485-201ENSMUST00000157990 109 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Gm24005-201ENSMUST00000158459 296 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Gm26213-201ENSMUST00000158582 110 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Gm24085-201ENSMUST00000175172 116 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Gm22929-201ENSMUST00000175517 107 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Gm45403-201ENSMUST00000209453 276 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Gm45815-201ENSMUST00000220241 146 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Gm25207-201ENSMUST00000093745 107 ntBASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Trav11A0A0B4J1J9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm14923-201ENSMUST00000118270 155 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm14269-201ENSMUST00000120455 306 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm14287-201ENSMUST00000121060 117 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm11389-201ENSMUST00000121407 430 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm26363-201ENSMUST00000158866 83 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm23419-201ENSMUST00000175523 84 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm29640-201ENSMUST00000187972 278 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm44408-201ENSMUST00000200205 66 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm45296-201ENSMUST00000209625 205 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm18113-201ENSMUST00000220630 303 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Gm25409-201ENSMUST00000083764 131 ntBASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.84□□□□□ -2.27
Trav11A0A0B4J1J9 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC0.84□□□□□ -2.28
Trav11A0A0B4J1J9 BC022960-201ENSMUST00000119987 1815 ntBASIC0.84□□□□□ -2.28
Trav11A0A0B4J1J9 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm24588-201ENSMUST00000116696 83 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm11254-201ENSMUST00000122368 653 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm22281-201ENSMUST00000157198 103 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm26049-201ENSMUST00000157313 108 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm25392-201ENSMUST00000157335 297 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm22664-201ENSMUST00000158719 105 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm27919-201ENSMUST00000185163 107 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm28414-201ENSMUST00000190111 294 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm9251-201ENSMUST00000197202 628 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Snora41-201ENSMUST00000082668 132 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm25128-201ENSMUST00000083339 76 ntBASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Trav11A0A0B4J1J9 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Mir301b-201ENSMUST00000102333 97 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm23951-201ENSMUST00000104029 132 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm23010-201ENSMUST00000104151 126 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm23836-201ENSMUST00000104434 129 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Snord98-201ENSMUST00000116819 65 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm13729-201ENSMUST00000120328 406 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm27926-201ENSMUST00000157180 66 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm22233-201ENSMUST00000157464 114 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm25868-201ENSMUST00000158253 114 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm25486-201ENSMUST00000158726 63 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm17148-201ENSMUST00000164702 249 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Mir7091-201ENSMUST00000184075 79 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Ighv1-46-201ENSMUST00000193988 351 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm18617-201ENSMUST00000222311 259 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm20102-201ENSMUST00000222445 220 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm26224-201ENSMUST00000082506 80 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Mir211-201ENSMUST00000083651 106 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.82□□□□□ -2.28
Trav11A0A0B4J1J9 Gm22935-201ENSMUST00000103960 104 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Gm24777-201ENSMUST00000157644 107 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Gm3027-201ENSMUST00000167579 451 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Mir3061-201ENSMUST00000175129 91 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Gm27313-201ENSMUST00000183500 142 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Mir7j-201ENSMUST00000184427 122 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Gm28648-201ENSMUST00000190092 343 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Gm22980-201ENSMUST00000082608 70 ntBASIC0.81□□□□□ -2.28
Trav11A0A0B4J1J9 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms