Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.02□□□□□ -2.25
Trav12-3A0A075B648 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Trav12-3A0A075B648 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.02□□□□□ -2.25
Trav12-3A0A075B648 Gm22249-201ENSMUST00000082485 136 ntBASIC1.02□□□□□ -2.25
Trav12-3A0A075B648 Gm26493-201ENSMUST00000083155 136 ntBASIC1.02□□□□□ -2.25
Trav12-3A0A075B648 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm25495-201ENSMUST00000104431 131 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm11798-201ENSMUST00000119150 421 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm6444-201ENSMUST00000119611 458 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm12309-201ENSMUST00000119889 182 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm13992-201ENSMUST00000120558 156 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm25863-201ENSMUST00000158249 329 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm22665-201ENSMUST00000158720 275 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm28489-201ENSMUST00000186655 316 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm28409-201ENSMUST00000187064 103 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm43472-201ENSMUST00000200175 154 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm45207-201ENSMUST00000207469 145 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm25592-201ENSMUST00000082635 131 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm22683-201ENSMUST00000082854 137 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm24355-201ENSMUST00000082858 122 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm25789-201ENSMUST00000083294 76 ntBASIC1.01□□□□□ -2.25
Trav12-3A0A075B648 Gm15102-201ENSMUST00000118740 1502 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Gm15101-201ENSMUST00000178818 1502 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Trav12-3A0A075B648 Gm26015-201ENSMUST00000104402 125 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Gm23907-201ENSMUST00000104595 189 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Gm15214-201ENSMUST00000122155 470 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Gm24498-201ENSMUST00000158445 102 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Mir6971-201ENSMUST00000183497 63 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Gm37089-201ENSMUST00000195616 129 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Gm44811-201ENSMUST00000209120 228 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Gm19855-201ENSMUST00000210145 249 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 CT025689.3-201ENSMUST00000223817 301 ntBASIC1□□□□□ -2.25
Trav12-3A0A075B648 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Trav12-3A0A075B648 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Trav12-3A0A075B648 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Mir544-201ENSMUST00000103813 78 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm23013-201ENSMUST00000104146 106 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm22164-201ENSMUST00000158413 106 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm23339-201ENSMUST00000158962 139 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm10105-201ENSMUST00000184601 270 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Mir6943-201ENSMUST00000185186 66 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm28992-201ENSMUST00000190534 139 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm42834-201ENSMUST00000196845 256 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm25038-201ENSMUST00000082928 130 ntBASIC0.99□□□□□ -2.25
Trav12-3A0A075B648 Gm26339-201ENSMUST00000102368 99 ntBASIC0.98□□□□□ -2.25
Trav12-3A0A075B648 Gm24915-201ENSMUST00000157288 78 ntBASIC0.98□□□□□ -2.25
Trav12-3A0A075B648 Gm26363-201ENSMUST00000158866 83 ntBASIC0.98□□□□□ -2.25
Trav12-3A0A075B648 Mir6408-201ENSMUST00000183643 91 ntBASIC0.98□□□□□ -2.25
Trav12-3A0A075B648 Gm27399-201ENSMUST00000184250 78 ntBASIC0.98□□□□□ -2.25
Trav12-3A0A075B648 Gm28927-201ENSMUST00000191528 272 ntBASIC0.98□□□□□ -2.25
Trav12-3A0A075B648 Gm43220-201ENSMUST00000199299 282 ntBASIC0.98□□□□□ -2.25
Trav12-3A0A075B648 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.98□□□□□ -2.25
Trav12-3A0A075B648 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.98□□□□□ -2.25
Trav12-3A0A075B648 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm23836-201ENSMUST00000104434 129 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm24274-201ENSMUST00000116787 124 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm12941-201ENSMUST00000117934 220 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Mir1904-201ENSMUST00000122702 80 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm22485-201ENSMUST00000157990 109 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm25373-201ENSMUST00000158156 115 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm27711-201ENSMUST00000183802 118 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm44477-201ENSMUST00000199661 110 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm24966-201ENSMUST00000082443 79 ntBASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
Trav12-3A0A075B648 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Gm14922-201ENSMUST00000121131 163 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Gm24691-201ENSMUST00000157762 140 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Gm22789-201ENSMUST00000157884 130 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Gm24499-201ENSMUST00000158446 104 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Gm22663-201ENSMUST00000158721 102 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Gm37399-201ENSMUST00000195224 416 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Gm43238-201ENSMUST00000196463 359 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 Gm43624-201ENSMUST00000197368 180 ntBASIC0.96□□□□□ -2.26
Trav12-3A0A075B648 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms