Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm26077-201ENSMUST00000104064 123 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm22151-201ENSMUST00000116963 58 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm13433-201ENSMUST00000121701 240 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm13725-201ENSMUST00000122139 207 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm23535-201ENSMUST00000157542 106 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm25711-201ENSMUST00000158633 128 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm28169-201ENSMUST00000190342 345 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm26265-202ENSMUST00000196326 133 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm43035-201ENSMUST00000197626 517 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm44482-201ENSMUST00000199232 103 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Mir1291-201ENSMUST00000199842 117 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm43993-201ENSMUST00000203972 247 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Snora34-201ENSMUST00000083402 138 ntBASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav1A0A075B5Z4 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm22193-201ENSMUST00000116868 76 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm11854-201ENSMUST00000117839 446 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Trav20-201ENSMUST00000142754 347 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm22666-201ENSMUST00000158717 164 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm25642-201ENSMUST00000175137 66 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm17067-202ENSMUST00000180131 123 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm27271-201ENSMUST00000183509 170 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Mir7678-201ENSMUST00000185076 71 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm37889-201ENSMUST00000194174 251 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Mir376a-201ENSMUST00000197584 68 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm6109-201ENSMUST00000223297 348 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trav1A0A075B5Z4 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm15536-201ENSMUST00000121411 114 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm25113-201ENSMUST00000157185 143 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm25115-201ENSMUST00000157187 140 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm24858-201ENSMUST00000158058 323 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm24572-201ENSMUST00000175505 88 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm18357-201ENSMUST00000188184 580 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm28951-201ENSMUST00000190742 313 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm37801-201ENSMUST00000194754 274 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Mir3970-201ENSMUST00000199287 90 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm42807-201ENSMUST00000200141 329 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm45791-201ENSMUST00000212908 352 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.66□□□□□ -2.14
Trav1A0A075B5Z4 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.65□□□□□ -2.15
Trav1A0A075B5Z4 Gm23469-201ENSMUST00000157131 104 ntBASIC1.65□□□□□ -2.15
Trav1A0A075B5Z4 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.65□□□□□ -2.15
Trav1A0A075B5Z4 Gm23963-201ENSMUST00000179603 77 ntBASIC1.65□□□□□ -2.15
Trav1A0A075B5Z4 Gm23003-201ENSMUST00000179948 107 ntBASIC1.65□□□□□ -2.15
Trav1A0A075B5Z4 Gm45386-201ENSMUST00000210194 218 ntBASIC1.65□□□□□ -2.15
Trav1A0A075B5Z4 Gm7214-201ENSMUST00000222428 272 ntBASIC1.65□□□□□ -2.15
Trav1A0A075B5Z4 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Gm11794-201ENSMUST00000119446 237 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Gm13967-201ENSMUST00000120404 380 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Gm11786-201ENSMUST00000120799 155 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Gm24225-201ENSMUST00000158825 98 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Mir7068-201ENSMUST00000183439 74 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Gm27878-201ENSMUST00000184000 106 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Mir3535-201ENSMUST00000197651 147 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Gm20144-201ENSMUST00000203031 165 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Gm22294-201ENSMUST00000083308 104 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Trav1A0A075B5Z4 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm13714-201ENSMUST00000117313 221 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm15215-201ENSMUST00000117773 489 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm11862-201ENSMUST00000119678 659 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm11471-201ENSMUST00000121824 198 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm15213-201ENSMUST00000122098 216 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm27723-201ENSMUST00000157398 63 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm23858-201ENSMUST00000158384 106 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm42672-201ENSMUST00000197821 352 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Mir378a-201ENSMUST00000198300 66 ntBASIC1.63□□□□□ -2.15
Trav1A0A075B5Z4 Gm44055-201ENSMUST00000204376 247 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms