Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm22227-201ENSMUST00000157356 259 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm23381-201ENSMUST00000157676 94 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm17100-201ENSMUST00000168963 272 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm25956-201ENSMUST00000175115 217 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm24573-201ENSMUST00000175499 112 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm25450-201ENSMUST00000179144 107 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Mir6997-201ENSMUST00000184313 71 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm29147-201ENSMUST00000186846 315 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm29227-201ENSMUST00000187139 315 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm29034-201ENSMUST00000188099 315 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm28160-201ENSMUST00000191229 315 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm37162-201ENSMUST00000191708 551 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm37129-201ENSMUST00000195791 315 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm43676-201ENSMUST00000197532 540 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm43035-201ENSMUST00000197626 517 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm22683-201ENSMUST00000082854 137 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm23378-201ENSMUST00000082942 107 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm26126-201ENSMUST00000083188 164 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm26265-201ENSMUST00000083277 135 ntBASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
H2afb2S4R1M3 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm14803-201ENSMUST00000117163 361 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm13432-201ENSMUST00000118861 241 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm14215-201ENSMUST00000120578 221 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm25059-201ENSMUST00000157367 117 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Mir3103-201ENSMUST00000175474 67 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm24572-201ENSMUST00000175505 88 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm21827-201ENSMUST00000178247 423 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm23003-201ENSMUST00000179948 107 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm28848-201ENSMUST00000189984 168 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm43250-201ENSMUST00000196536 273 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Mir3970-201ENSMUST00000199287 90 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm44909-201ENSMUST00000208756 165 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm18991-201ENSMUST00000209225 746 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm23625-201ENSMUST00000082457 100 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
H2afb2S4R1M3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Mir3096-201ENSMUST00000116685 71 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm13729-201ENSMUST00000120328 406 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm11606-201ENSMUST00000120706 617 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm22598-201ENSMUST00000157600 127 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm25888-201ENSMUST00000157778 302 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm22447-201ENSMUST00000158155 92 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm23579-201ENSMUST00000158528 103 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm28288-201ENSMUST00000191019 214 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Mir7227-201ENSMUST00000200408 59 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm43914-201ENSMUST00000203592 594 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm24460-201ENSMUST00000082731 106 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm23462-201ENSMUST00000083264 104 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
H2afb2S4R1M3 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.76□□□□□ -2.13
H2afb2S4R1M3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm14748-201ENSMUST00000119819 411 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm15379-201ENSMUST00000121224 648 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm25933-201ENSMUST00000178943 108 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm20923-201ENSMUST00000190009 319 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm21088-201ENSMUST00000190875 316 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm42594-201ENSMUST00000199511 246 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm44473-201ENSMUST00000204039 152 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm45005-201ENSMUST00000206640 157 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm22062-201ENSMUST00000082563 107 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.75□□□□□ -2.13
H2afb2S4R1M3 Gm22678-201ENSMUST00000116974 101 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm11572-201ENSMUST00000119164 120 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm15067-201ENSMUST00000119534 156 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm6444-201ENSMUST00000119611 458 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm25368-201ENSMUST00000158847 131 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm23921-201ENSMUST00000175258 107 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm20613-201ENSMUST00000175828 345 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29512-201ENSMUST00000185544 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28110-201ENSMUST00000185782 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29057-201ENSMUST00000186468 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29661-201ENSMUST00000186781 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28737-201ENSMUST00000186808 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29118-201ENSMUST00000186908 315 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 179.7 ms