Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 Gm38149-201ENSMUST00000191943 339 ntBASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 Gm37997-201ENSMUST00000193515 267 ntBASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 Gm37361-201ENSMUST00000194345 132 ntBASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 AC154506.3-201ENSMUST00000225417 213 ntBASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 Gm25851-201ENSMUST00000082794 107 ntBASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 Snord32a-201ENSMUST00000083285 83 ntBASIC0.47□□□□□ -2.33
Scn8aQ9WTU3 Gm22597-201ENSMUST00000157602 80 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm22186-201ENSMUST00000157822 122 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm23278-201ENSMUST00000157911 143 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Mir15a-201ENSMUST00000175266 84 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm25247-201ENSMUST00000175475 90 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm38395-201ENSMUST00000199904 830 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm19855-201ENSMUST00000210145 249 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm25384-201ENSMUST00000157807 105 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm23034-201ENSMUST00000158001 147 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm24510-201ENSMUST00000174965 94 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Mir3061-201ENSMUST00000175129 91 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm22290-201ENSMUST00000177655 107 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm27974-201ENSMUST00000183415 105 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm37923-201ENSMUST00000191624 161 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.46□□□□□ -2.34
Scn8aQ9WTU3 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm14417-201ENSMUST00000120036 1074 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm23184-201ENSMUST00000122594 131 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm23390-201ENSMUST00000157393 106 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm23180-201ENSMUST00000158686 125 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm27421-201ENSMUST00000184729 167 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm37869-201ENSMUST00000193385 595 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm26228-201ENSMUST00000082512 107 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm24311-201ENSMUST00000082570 104 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm25651-201ENSMUST00000083782 119 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm25518-201ENSMUST00000083864 107 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm15266-201ENSMUST00000119635 255 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm24439-201ENSMUST00000157894 117 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm16588-201ENSMUST00000162889 355 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm8219-201ENSMUST00000218309 242 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm26203-201ENSMUST00000082911 114 ntBASIC0.45□□□□□ -2.34
Scn8aQ9WTU3 Gm26002-201ENSMUST00000101915 107 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm22193-201ENSMUST00000116868 76 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm23118-201ENSMUST00000122657 187 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm22233-201ENSMUST00000157464 114 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm25868-201ENSMUST00000158253 114 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm22403-201ENSMUST00000174919 84 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm23568-201ENSMUST00000177960 92 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm24862-201ENSMUST00000179103 79 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm23310-201ENSMUST00000179105 79 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm24829-201ENSMUST00000179245 92 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm25461-201ENSMUST00000179293 79 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm7495-201ENSMUST00000215099 426 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm45815-201ENSMUST00000220241 146 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Scn8aQ9WTU3 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm25413-201ENSMUST00000158544 312 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm24366-201ENSMUST00000175383 86 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm25253-201ENSMUST00000179958 107 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm38231-201ENSMUST00000192030 347 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 AC120553.1-201ENSMUST00000227313 260 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Mir10a-201ENSMUST00000083585 110 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm22048-201ENSMUST00000104721 89 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm7916-201ENSMUST00000120325 456 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm24892-201ENSMUST00000122747 104 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm17100-201ENSMUST00000168963 272 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm24084-201ENSMUST00000175173 137 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm23619-201ENSMUST00000178411 94 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm25474-201ENSMUST00000179052 94 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm22047-201ENSMUST00000179176 94 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm22633-201ENSMUST00000179834 107 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm44870-201ENSMUST00000207291 357 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Scn8aQ9WTU3 Gm24430-201ENSMUST00000104077 104 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm24555-201ENSMUST00000104548 124 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm14355-201ENSMUST00000117352 264 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms