Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm34779-201ENSMUST00000210036 263 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Gm25588-201ENSMUST00000082501 140 ntBASIC3.7□□□□□ -1.82
Nubp1Q9R060 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nubp1Q9R060 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nubp1Q9R060 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Nubp1Q9R060 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nubp1Q9R060 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nubp1Q9R060 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nubp1Q9R060 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Gm24375-201ENSMUST00000104397 132 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Gm26036-201ENSMUST00000158149 144 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 Gm24837-201ENSMUST00000158683 81 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Gm37300-201ENSMUST00000193327 280 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 Gm26168-201ENSMUST00000083787 112 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.69□□□□□ -1.82
Nubp1Q9R060 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Nubp1Q9R060 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm24171-201ENSMUST00000104126 131 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm25168-201ENSMUST00000104189 132 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm13588-201ENSMUST00000120026 135 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm22968-201ENSMUST00000157955 118 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm22853-201ENSMUST00000174974 131 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm22510-201ENSMUST00000179304 79 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm26336-201ENSMUST00000179449 79 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm26390-201ENSMUST00000179628 79 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Mir6996-201ENSMUST00000183922 61 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm6060-201ENSMUST00000188671 251 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm36964-201ENSMUST00000191876 198 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Mir155-201ENSMUST00000083463 65 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Mir489-201ENSMUST00000093599 107 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.68□□□□□ -1.82
Nubp1Q9R060 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Nubp1Q9R060 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Nubp1Q9R060 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Nubp1Q9R060 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
Nubp1Q9R060 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.68□□□□□ -1.82
Nubp1Q9R060 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Nubp1Q9R060 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm13314-201ENSMUST00000118742 335 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm23865-201ENSMUST00000157723 97 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm23859-201ENSMUST00000158383 64 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm27698-201ENSMUST00000184060 249 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm29408-201ENSMUST00000187536 216 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 AC133189.1-201ENSMUST00000198820 140 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm5358-201ENSMUST00000212814 353 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm25800-201ENSMUST00000082636 134 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm23244-201ENSMUST00000083375 92 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Mir9-2-201ENSMUST00000083490 72 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm23038-201ENSMUST00000083873 104 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.67□□□□□ -1.82
Nubp1Q9R060 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nubp1Q9R060 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Nubp1Q9R060 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nubp1Q9R060 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nubp1Q9R060 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nubp1Q9R060 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nubp1Q9R060 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nubp1Q9R060 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Nubp1Q9R060 Gm25727-201ENSMUST00000104522 131 ntBASIC3.66□□□□□ -1.82
Nubp1Q9R060 Gm14602-201ENSMUST00000118625 340 ntBASIC3.66□□□□□ -1.82
Nubp1Q9R060 Gm14282-201ENSMUST00000119484 240 ntBASIC3.66□□□□□ -1.82
Nubp1Q9R060 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.66□□□□□ -1.82
Nubp1Q9R060 Gm45796-201ENSMUST00000212483 114 ntBASIC3.66□□□□□ -1.82
Nubp1Q9R060 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.66□□□□□ -1.82
Nubp1Q9R060 Gm25124-201ENSMUST00000083345 164 ntBASIC3.66□□□□□ -1.82
Nubp1Q9R060 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nubp1Q9R060 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.66□□□□□ -1.82
Nubp1Q9R060 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Nubp1Q9R060 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.65□□□□□ -1.82
Nubp1Q9R060 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Nubp1Q9R060 Gm13478-201ENSMUST00000118312 413 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 Gm25544-201ENSMUST00000122676 120 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 Gm26276-201ENSMUST00000157099 109 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 Mir1251-201ENSMUST00000175486 84 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 Gm5224-201ENSMUST00000183060 350 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 Gm27189-201ENSMUST00000184119 190 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms