Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Gm22768-201ENSMUST00000158366 153 ntBASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Gm7495-201ENSMUST00000215099 426 ntBASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Rny3-201ENSMUST00000083011 102 ntBASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Gm24043-201ENSMUST00000083108 116 ntBASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.42□□□□□ -2.18
Clcf1Q9QZM3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm14296-202ENSMUST00000108931 750 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Mir3096-201ENSMUST00000116685 71 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm11254-201ENSMUST00000122368 653 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm6956-201ENSMUST00000134724 546 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm22221-201ENSMUST00000157362 103 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm22263-201ENSMUST00000180060 104 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm18291-201ENSMUST00000190791 301 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm19901-201ENSMUST00000192191 495 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Gm44149-201ENSMUST00000204256 226 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Mir320-201ENSMUST00000083594 82 ntBASIC1.41□□□□□ -2.18
Clcf1Q9QZM3 Mir374b-201ENSMUST00000102314 95 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm13714-201ENSMUST00000117313 221 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm12417-201ENSMUST00000119153 403 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm23435-201ENSMUST00000157183 156 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm24348-201ENSMUST00000158710 130 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm20438-201ENSMUST00000174441 329 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm27248-201ENSMUST00000184004 166 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Mir7093-201ENSMUST00000184195 101 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm10105-201ENSMUST00000184601 270 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm28995-201ENSMUST00000186625 261 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm18546-201ENSMUST00000197245 676 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm44010-201ENSMUST00000204432 331 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 Gm25636-201ENSMUST00000082666 133 ntBASIC1.4□□□□□ -2.19
Clcf1Q9QZM3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm14803-201ENSMUST00000117163 361 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm6829-201ENSMUST00000119858 360 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm22791-201ENSMUST00000157232 145 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm22510-201ENSMUST00000179304 79 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm26336-201ENSMUST00000179449 79 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm26390-201ENSMUST00000179628 79 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm26200-201ENSMUST00000180273 79 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm38050-201ENSMUST00000191904 238 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Gm22365-201ENSMUST00000093750 117 ntBASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.39□□□□□ -2.19
Clcf1Q9QZM3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm26080-201ENSMUST00000104069 131 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm42606-201ENSMUST00000114209 239 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm14972-201ENSMUST00000121780 364 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm25827-201ENSMUST00000157089 107 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm25831-201ENSMUST00000158924 163 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm24308-201ENSMUST00000177773 114 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm24799-201ENSMUST00000178431 79 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm25253-201ENSMUST00000179958 107 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm27410-201ENSMUST00000183851 115 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm26265-202ENSMUST00000196326 133 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm43238-201ENSMUST00000196463 359 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gm24151-201ENSMUST00000082758 141 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.38□□□□□ -2.19
Clcf1Q9QZM3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Clcf1Q9QZM3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms