Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm24005-201ENSMUST00000158459 296 ntBASIC1.14□□□□□ -2.23
Trem1Q9JKE2 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.14□□□□□ -2.23
Trem1Q9JKE2 Gm17052-201ENSMUST00000165496 289 ntBASIC1.14□□□□□ -2.23
Trem1Q9JKE2 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.14□□□□□ -2.23
Trem1Q9JKE2 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.14□□□□□ -2.23
Trem1Q9JKE2 Gm26314-201ENSMUST00000083891 107 ntBASIC1.14□□□□□ -2.23
Trem1Q9JKE2 Gm25507-201ENSMUST00000116981 144 ntBASIC1.13□□□□□ -2.23
Trem1Q9JKE2 Gm14922-201ENSMUST00000121131 163 ntBASIC1.13□□□□□ -2.23
Trem1Q9JKE2 Gm11254-201ENSMUST00000122368 653 ntBASIC1.13□□□□□ -2.23
Trem1Q9JKE2 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.13□□□□□ -2.23
Trem1Q9JKE2 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.13□□□□□ -2.23
Trem1Q9JKE2 Gm36953-201ENSMUST00000195295 268 ntBASIC1.13□□□□□ -2.23
Trem1Q9JKE2 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Mir758-201ENSMUST00000103260 81 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Gm23535-201ENSMUST00000157542 106 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Gm22074-201ENSMUST00000158595 113 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Mir1936-201ENSMUST00000158699 93 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Mir3061-201ENSMUST00000175129 91 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Gm24085-201ENSMUST00000175172 116 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Gm27957-201ENSMUST00000184054 127 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Trbv7-201ENSMUST00000193339 402 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.12□□□□□ -2.23
Trem1Q9JKE2 Gm23836-201ENSMUST00000104434 129 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm24588-201ENSMUST00000116696 83 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm22551-201ENSMUST00000157795 103 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm23277-201ENSMUST00000157914 136 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm24808-201ENSMUST00000157993 118 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm25707-201ENSMUST00000175120 96 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm29167-201ENSMUST00000190024 377 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm37162-201ENSMUST00000191708 551 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm38395-201ENSMUST00000199904 830 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm43993-201ENSMUST00000203972 247 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm19855-201ENSMUST00000210145 249 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Gm20102-201ENSMUST00000222445 220 ntBASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
Trem1Q9JKE2 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm25168-201ENSMUST00000104189 132 ntBASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm14803-201ENSMUST00000117163 361 ntBASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm13729-201ENSMUST00000120328 406 ntBASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm22425-201ENSMUST00000158532 138 ntBASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm26335-201ENSMUST00000178449 107 ntBASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm37054-201ENSMUST00000193481 543 ntBASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.1□□□□□ -2.23
Trem1Q9JKE2 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.1□□□□□ -2.23
Trem1Q9JKE2 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm26108-201ENSMUST00000083973 191 ntBASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Trem1Q9JKE2 Gm23950-201ENSMUST00000104026 129 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Mir872-201ENSMUST00000104728 81 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm13475-201ENSMUST00000119290 234 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm24394-201ENSMUST00000158141 123 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm24577-201ENSMUST00000158580 63 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm25958-201ENSMUST00000175114 71 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm27793-201ENSMUST00000183405 76 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm27313-201ENSMUST00000183500 142 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm44282-201ENSMUST00000203199 190 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm44830-201ENSMUST00000207667 584 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Trem1Q9JKE2 Gm23731-201ENSMUST00000083749 107 ntBASIC1.09□□□□□ -2.23
Trem1Q9JKE2 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.09□□□□□ -2.24
Trem1Q9JKE2 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.09□□□□□ -2.24
Trem1Q9JKE2 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.09□□□□□ -2.24
Trem1Q9JKE2 Gm14269-201ENSMUST00000120455 306 ntBASIC1.08□□□□□ -2.24
Trem1Q9JKE2 Gm11358-201ENSMUST00000122310 373 ntBASIC1.08□□□□□ -2.24
Trem1Q9JKE2 Gm22227-201ENSMUST00000157356 259 ntBASIC1.08□□□□□ -2.24
Trem1Q9JKE2 Gm23122-201ENSMUST00000157645 103 ntBASIC1.08□□□□□ -2.24
Trem1Q9JKE2 Gm18588-201ENSMUST00000177308 492 ntBASIC1.08□□□□□ -2.24
Trem1Q9JKE2 Mir211-201ENSMUST00000083651 106 ntBASIC1.08□□□□□ -2.24
Trem1Q9JKE2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trem1Q9JKE2 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm26089-201ENSMUST00000157898 107 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm27817-201ENSMUST00000184302 233 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Mir7226-201ENSMUST00000184953 60 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm20118-201ENSMUST00000187207 162 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm37399-201ENSMUST00000195224 416 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm5001-201ENSMUST00000204361 331 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm23515-201ENSMUST00000082829 107 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm25409-201ENSMUST00000083764 131 ntBASIC1.07□□□□□ -2.24
Trem1Q9JKE2 Gm25683-201ENSMUST00000083940 131 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms